RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 AGAP11Q8TF27 550 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 DNAJA4Q8WW22 397 aaPredicted RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 UBE2E3Q969T4 207 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 RASD2Q96D21 266 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 CXorf40BQ96DE9 158 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SERAC1Q96JX3 654 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 GAL3ST1Q99999 423 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 APOL2Q9BQE5 337 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TUBGCP2Q9BSJ2 902 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 DPH7Q9BTV6 452 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 PKIBQ9C010 78 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 NMUR2Q9GZQ4 415 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 NAT10Q9H0A0 1025 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 PPA2Q9H2U2 334 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 RNF167Q9H6Y7 350 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 NMRAL1Q9HBL8 299 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 DDX18Q9NVP1 670 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 THUMPD1Q9NXG2 353 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SENP1Q9P0U3 644 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SPATA7Q9P0W8 599 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 SPRR3Q9UBC9 169 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 PHF11Q9UIL8 331 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 UBQLN1Q9UMX0 589 aaKnown RBP2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 RASD1Q9Y272 281 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 KCNIP3Q9Y2W7 256 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 PLLPQ9Y342 182 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 TMED5Q9Y3A6 229 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 NPTNQ9Y639 398 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 ANKRD30BQ9BXX2 1392 aa2.46□□□□□ -2.02
SHCBP1-202ENST00000563219 AGRNO00468 2067 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 TUBAL3A6NHL2 446 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 E7ESA3 106 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 GOLGA8SH3BPF8 625 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 TEX46H3BTG2 121 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 DNALI1O14645 258 aaPredicted RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 PPP1R2P9O14990 202 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 HCN1O60741 890 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 WBP4O75554 376 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 UGT2B17O75795 530 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 SLITRK3O94933 977 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 DUSP14O95147 198 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 TNNI1P19237 187 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 CCNCP24863 283 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 GDF1P27539 372 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 NMT1P30419 496 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 CDH4P55283 916 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 RPS14P62263 151 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 RPL32P62910 135 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 OGDHQ02218 1023 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 CD47Q08722 323 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 SLC10A7Q0GE19 358 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 DPYSL2Q16555 572 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 DUSP7Q16829 419 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 Q1RN00 199 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 KLHL38Q2WGJ6 581 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 GPRC6AQ5T6X5 926 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 OR52E8Q6IFG1 317 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 LRRC31Q6UY01 552 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 RUFY3Q7L099 469 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 ASCL5Q7RTU5 278 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 RAB3IL1Q8TBN0 382 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 TFB1MQ8WVM0 346 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 GTSF1Q8WW33 167 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 TCTEX1D2Q8WW35 142 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 EFHD2Q96C19 240 aaPredicted RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 PLEKHA8Q96JA3 519 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 ZNF641Q96N77 438 aaPredicted RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 MCHR1Q99705 422 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 MAPKAP1Q9BPZ7 522 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 SLC35A5Q9BS91 424 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 NIPSNAP3BQ9BS92 247 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 NAT9Q9BTE0 207 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 PARD6BQ9BYG5 372 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 NHEJ1Q9H9Q4 299 aaPredicted RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 RAB20Q9NX57 234 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 SLC2A8Q9NY64 477 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 PTTG3PQ9NZH4 202 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 OR1A1Q9P1Q5 309 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 ABCD2Q9UBJ2 740 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 KIAA1257Q9ULG3 409 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 COPS3Q9UNS2 423 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 SAMD4AQ9UPU9 718 aaKnown RBP2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 ERVW-1Q9UQF0 538 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 PLEKHH1Q9ULM0 1364 aa2.45□□□□□ -2.02
SHCBP1-202ENST00000563219 TTC21BQ7Z4L5 1316 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 POGZQ7Z3K3 1410 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 A0A075B6Q4 140 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 SERTM2A0A1B0GWG4 89 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 A0A1W2PQ72 361 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 SMCO2A6NFE2 343 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 DHRS7CA6NNS2 312 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 IDSB3KWA1 339 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 UPK3AO75631 287 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 CLDN9O95484 217 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 STAMBPO95630 424 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 CST1P01037 141 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 MMP1P03956 469 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 H2AFZP0C0S5 128 aa2.44□□□□□ -2.02
SHCBP1-202ENST00000563219 YWHABP31946 246 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms