RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 GKN3PP0CG01 181 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 PRG2P13727 222 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ETFAP13804 333 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 TACR3P29371 465 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 APOBEC1P41238 236 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 SLC16A1P53985 500 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 CLNS1AP54105 237 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 OR2B6P58173 313 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 H3F3AP84243 136 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 LGALS3BPQ08380 585 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 EPS8Q12929 822 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 VEZF1Q14119 521 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 CLEC12BQ2HXU8 276 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 DPY19L1Q2PZI1 675 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 FBXW9Q5XUX1 488 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ZNF836Q6ZNA1 936 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ZNF621Q6ZSS3 439 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ZNF100Q8IYN0 542 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 LRRC34Q8IZ02 419 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 WDR31Q8NA23 367 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 SLC25A43Q8WUT9 341 aaPredicted RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 WDR60Q8WVS4 1066 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 MAELQ96JY0 434 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 TRNT1Q96Q11 434 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 OR52E6Q96RD3 313 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 PANX1Q96RD7 426 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 C1QTNF6Q9BXI9 259 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 SLCO5A1Q9H2Y9 848 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ESRP2Q9H6T0 727 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 FANCFQ9NPI8 374 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 SERINC1Q9NRX5 453 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 NOSIPQ9Y314 301 aaKnown RBP11.92□□□□□ -0.5
VPS18-203ENST00000558855 FLVCR1Q9Y5Y0 555 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 SLC25A15Q9Y619 301 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ALPK2Q86TB3 2170 aa11.92□□□□□ -0.5
VPS18-203ENST00000558855 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 A0A1W2PP18 115 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 ZNF500O60304 480 aaPredicted RBP11.91□□□□□ -0.5
VPS18-203ENST00000558855 AGR2O95994 175 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 NUDT7P0C024 238 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 HOXB9P17482 250 aaPredicted RBP11.91□□□□□ -0.5
VPS18-203ENST00000558855 GGT1P19440 569 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
VPS18-203ENST00000558855 ZNF83P51522 516 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 CDH11P55287 796 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 CSNK2A1P68400 391 aaPredicted RBP11.91□□□□□ -0.5
VPS18-203ENST00000558855 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
VPS18-203ENST00000558855 BNIP2Q12982 314 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 PDK3Q15120 406 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 GABRA6Q16445 453 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 TIMM23BQ5SRD1 257 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 C11orf71Q6IPW1 123 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 LRRC74BQ6ZQY2 392 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 C10orf111Q8N326 155 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 SLC7A10Q9NS82 523 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
VPS18-203ENST00000558855 MALT1Q9UDY8 824 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 HDGFL3Q9Y3E1 203 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
VPS18-203ENST00000558855 ABCA1O95477 2261 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 A0A096LNT2 108 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 FAM171A2A8MVW0 826 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 HDAC3O15379 428 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 P2RY4P51582 365 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 SLC17A1Q14916 467 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 TSPO2Q5TGU0 170 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 HHATQ5VTY9 493 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 SPATA19Q7Z5L4 167 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 COMTD1Q86VU5 262 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 UBE2J2Q8N2K1 259 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 CLIP4Q8N3C7 705 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 TMEM99Q8N816 258 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 VPS37AQ8NEZ2 397 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 APH1AQ96BI3 265 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 ZNF385AQ96PM9 386 aaKnown RBP11.9□□□□□ -0.5
VPS18-203ENST00000558855 ADAM19Q9H013 955 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 TMEM181Q9P2C4 612 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 B3GALT5Q9Y2C3 310 aa11.9□□□□□ -0.5
VPS18-203ENST00000558855 CDHR4A6H8M9 788 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 FRS3O43559 492 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 SNUPNO95149 360 aaKnown RBP11.89□□□□□ -0.51
VPS18-203ENST00000558855 AKR7A3O95154 331 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 BCHEP06276 602 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 NR2F1P10589 423 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 POLR2HP52434 150 aaKnown RBP11.89□□□□□ -0.51
VPS18-203ENST00000558855 HPCAP84074 193 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 HOXC5Q00444 222 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 PDCD4Q53EL6 469 aaKnown RBP11.89□□□□□ -0.51
VPS18-203ENST00000558855 CASP12Q6UXS9 341 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 LINGO2Q7L985 606 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
VPS18-203ENST00000558855 PIGXQ8TBF5 258 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 OIT3Q8WWZ8 545 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 GTPBP3Q969Y2 492 aaKnown RBP11.89□□□□□ -0.51
VPS18-203ENST00000558855 REG4Q9BYZ8 158 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 AMBRA1Q9C0C7 1298 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms