RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SCDO00767 359 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 SOX30O94993 753 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 DDAH2O95865 285 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 SBK2P0C263 348 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 UBL4AP11441 157 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 MST1P26927 711 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 DHPSP49366 369 aaPredicted RBP9.67□□□□□ -0.86
TPM1-210ENST00000558264 RAB15P59190 212 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 TP53I3Q53FA7 332 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 LINC00114Q6XXX2 140 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 PRR23CQ6ZRP0 262 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 PLXDC1Q8IUK5 500 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 SDR16C5Q8N3Y7 309 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 OR5J2Q8NH18 312 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 OR52N1Q8NH53 320 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 PMM1Q92871 262 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 CCDC74AQ96AQ1 378 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 ZNF304Q9HCX3 659 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 BABAM2Q9NXR7 383 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 EPHA6Q9UF33 1036 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 ZMIZ1Q9ULJ6 1067 aa9.67□□□□□ -0.86
TPM1-210ENST00000558264 FER1L5A0AVI2 2057 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 SLC22A31A6NKX4 558 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ELOA3DA6NLF2 546 aaPredicted RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 POLR1CO15160 346 aaPredicted RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 RNF13O43567 381 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 NUDT21O43809 227 aaKnown RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 HPGDSO60760 199 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 NDUFB2O95178 105 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 TFP02787 698 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 IFI6P09912 130 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 SLC2A5P22732 501 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 AQP2P41181 271 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ZNF85Q03923 595 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 SHBQ15464 509 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 TOMM34Q15785 309 aaPredicted RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 ELOA3BQ3SY89 546 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 OTPQ5XKR4 325 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 RPL13AP3Q6NVV1 102 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 IL20RBQ6UXL0 311 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 MARCH3Q86UD3 253 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 C9orf40Q8IXQ3 194 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ELOA3Q8NG57 546 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 OR2I1PQ8NGU4 316 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 OR6K6Q8NGW6 343 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 OR5W2Q8NH69 310 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ZNF721Q8TF20 911 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 THAP3Q8WTV1 239 aaPredicted RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 TSSK2Q96PF2 358 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ASB6Q9NWX5 421 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 TBC1D24Q9ULP9 559 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 IQCMA0A1B0GVH7 501 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 TRDV1A0A1B0GX56 115 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 H7C1C5 153 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 NUDT14O95848 222 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 F13BP05160 661 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 FOSL2P15408 326 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 GLB1P16278 677 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 PYCR1P32322 319 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 RORAP35398 523 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 RBM34P42696 430 aaKnown RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 GPR143P51810 404 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 EPHA4P54764 986 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 LCN6P62502 163 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 SKP2Q13309 424 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.66□□□□□ -0.86
TPM1-210ENST00000558264 CD200R1LQ6Q8B3 271 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 CCBE1Q6UXH8 406 aaPredicted RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 NR2C2APQ86WQ0 139 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ZNF563Q8TA94 476 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 NEDD4LQ96PU5 975 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 ELF4Q99607 663 aaPredicted RBP9.66□□□□□ -0.86
TPM1-210ENST00000558264 SLC7A5P2Q9GIP4 190 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 VN1R1Q9GZP7 353 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 UBQLN4Q9NRR5 601 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 CHRNA9Q9UGM1 479 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 SIT1Q9Y3P8 196 aa9.66□□□□□ -0.86
TPM1-210ENST00000558264 TP53BP1Q12888 1972 aaPredicted RBP9.65□□□□□ -0.86
TPM1-210ENST00000558264 IGKV3D-11A0A0A0MRZ8 115 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 A0A1B0GVC2 190 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 A0A1W2PQ09 198 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 A0A1W2PRG6 482 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 ISPDA4D126 451 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 BLACEA4D250 179 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 FABP12A6NFH5 140 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 A6NIN4 97 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 EFCAB7A8K855 629 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 HCRTR2O43614 444 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 SELENOFO60613 162 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
TPM1-210ENST00000558264 HLA-DPB1P04440 258 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 ITPKBP27987 946 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 ETV6P41212 452 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 PSMD4P55036 377 aaKnown RBP9.65□□□□□ -0.86
TPM1-210ENST00000558264 GALEQ14376 348 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 AGAP7PQ5VUJ5 663 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 ARHGAP11AQ6P4F7 1023 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 GUSBP11Q6P575 273 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 DNASE2BQ8WZ79 361 aa9.65□□□□□ -0.86
TPM1-210ENST00000558264 LCORQ96JN0 433 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms