RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 WLSQ5T9L3 541 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 KLHL17Q6TDP4 642 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 P3H2Q8IVL5 708 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 C10orf53Q8N6V4 93 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 FAM83FQ8NEG4 500 aaPredicted RBP15.25■□□□□ 0.03
SNX1-203ENST00000558040 ZNF555Q8NEP9 628 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 ABHD17AQ96GS6 310 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 ARHGAP9Q9BRR9 750 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 GABARAPL3Q9BY60 117 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 TOR3AQ9H497 397 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 RIBC2Q9H4K1 309 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 Q9H521 79 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 C20orf141Q9NUB4 165 aa15.25■□□□□ 0.03
SNX1-203ENST00000558040 UNC119BA6NIH7 251 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 GJE1A6NN92 205 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 FAM166BA8MTA8 275 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 SHISA8B8ZZ34 492 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 KLF4O43474 513 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 OR2T1O43869 369 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 MITFO75030 526 aaPredicted RBP15.24■□□□□ 0.03
SNX1-203ENST00000558040 HPNP05981 417 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 TFPIP10646 304 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 OSMP13725 252 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 RFC3P40938 356 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 SLC9A3P48764 834 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 CD97P48960 835 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 CLK1P49759 484 aaKnown RBP15.24■□□□□ 0.03
SNX1-203ENST00000558040 ESRRGP62508 458 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 PPIAP62937 165 aaKnown RBP15.24■□□□□ 0.03
SNX1-203ENST00000558040 EGR4Q05215 589 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 ZIK1Q3SY52 487 aaPredicted RBP15.24■□□□□ 0.03
SNX1-203ENST00000558040 C1orf140Q5VVS0 124 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 Q6ZS92 163 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 RASSF6Q6ZTQ3 369 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 YRDCQ86U90 279 aaKnown RBP15.24■□□□□ 0.03
SNX1-203ENST00000558040 FAM109AQ8N4B1 249 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 DHRSXQ8N5I4 330 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 TMEM251Q8N6I4 163 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 OR5M1Q8NGP8 315 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 OR6S1Q8NH40 331 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 SFXN2Q96NB2 322 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 NPAS1Q99742 590 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 ADI1Q9BV57 179 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 POTEKPQ9BYX7 375 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 TUBD1Q9UJT1 453 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 RAB26Q9ULW5 256 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 CACNA1AO00555 2505 aa15.24■□□□□ 0.03
SNX1-203ENST00000558040 PCNX3Q9H6A9 2034 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 OR2M5A3KFT3 312 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 DLGAP1O14490 977 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 NPIPB7O75200 414 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 OR7A10O76100 309 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 WISP1O95388 367 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 CH25HO95992 272 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 MT-ATP6P00846 226 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 MAKP20794 623 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 MAGEA5P43359 124 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 NPRL3Q12980 569 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 INAQ16352 499 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 SYT14P1Q58G82 188 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 NHSL2Q5HYW2 709 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 FAM69AQ5T7M9 428 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 RPL13AP3Q6NVV1 102 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 MEX3DQ86XN8 651 aaKnown RBP15.23■□□□□ 0.03
SNX1-203ENST00000558040 CLDN22Q8N7P3 220 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 ATP6V1C2Q8NEY4 427 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 C9orf43Q8TAL5 461 aaPredicted RBP15.23■□□□□ 0.03
SNX1-203ENST00000558040 CYGBQ8WWM9 190 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 KTI12Q96EK9 354 aaPredicted RBP15.23■□□□□ 0.03
SNX1-203ENST00000558040 MBOAT4Q96T53 435 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 GPA33Q99795 319 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 ADNPQ9H2P0 1102 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 FKRPQ9H9S5 495 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 B3GNT3Q9Y2A9 372 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 TP53TG5Q9Y2B4 290 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 ZNF337Q9Y3M9 751 aa15.23■□□□□ 0.03
SNX1-203ENST00000558040 ZC3H12DA2A288 527 aaKnown RBP15.22■□□□□ 0.03
SNX1-203ENST00000558040 H0YAE9 185 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 H3BML4 177 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 H3BN98 237 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 CDC42EP2O14613 210 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 HCN1O60741 890 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 PDGFAP04085 211 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 HIST1H2ABP04908 130 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 ZNF24P17028 368 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 FUT1P19526 365 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 CHMP24386 653 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 IDUAP35475 653 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 CAPGP40121 348 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 RPS5P46782 204 aaKnown RBP15.22■□□□□ 0.03
SNX1-203ENST00000558040 NUP107P57740 925 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 RAC1P63000 192 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 SLC10A1Q14973 349 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 MFSD13AQ14CX5 517 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 ZNF74Q16587 644 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 WIPI1Q5MNZ9 446 aaPredicted RBP15.22■□□□□ 0.03
SNX1-203ENST00000558040 TTC23Q5W5X9 447 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 ASB18Q6ZVZ8 466 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 HIST3H2AQ7L7L0 130 aa15.22■□□□□ 0.03
SNX1-203ENST00000558040 MAMDC2Q7Z304 686 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms