RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 IGKV1D-8A0A087WSZ0 117 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 FAM170AA1A519 330 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 CFAP73A6NFT4 308 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 TRIM64A6NGJ6 449 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 TRIM64BA6NI03 449 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 ARHGAP42A6NI28 874 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 BCAS2O75934 225 aaPredicted RBP1.02□□□□□ -2.25
SRP54-207ENST00000555535 MPZL1O95297 269 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 MT-ATP6P00846 226 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 PGAM1P18669 254 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 HLA-DPA1P20036 260 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 PAICSP22234 425 aaKnown RBP1.02□□□□□ -2.25
SRP54-207ENST00000555535 SFNP31947 248 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 ATP6V1E1P36543 226 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 BDKRB1P46663 353 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 ARF5P84085 180 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 CUL1Q13616 776 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 EXOSC2Q13868 293 aaKnown RBP1.02□□□□□ -2.25
SRP54-207ENST00000555535 PDK1Q15118 436 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 CHI3L2Q15782 390 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 ATL3Q6DD88 541 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 PRSS41Q7RTY9 318 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 PGAM4Q8N0Y7 254 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 SVOPLQ8N434 492 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 STKLD1Q8NE28 680 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 OR6C4Q8NGE1 309 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 SYNPRQ8TBG9 265 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 DTX3LQ8TDB6 740 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 SDSLQ96GA7 329 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 NSMCE2Q96MF7 247 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 RUFY1Q96T51 708 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 WRAP53Q9BUR4 548 aaKnown RBP1.02□□□□□ -2.25
SRP54-207ENST00000555535 RHOJQ9H4E5 214 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 RPAP3Q9H6T3 665 aaPredicted RBP1.02□□□□□ -2.25
SRP54-207ENST00000555535 VCPKMTQ9H867 229 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 CYP39A1Q9NYL5 469 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 HMG20BQ9P0W2 317 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 SPASTQ9UBP0 616 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 WARS2Q9UGM6 360 aaKnown RBP1.02□□□□□ -2.25
SRP54-207ENST00000555535 CYTH4Q9UIA0 394 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 DNPEPQ9ULA0 475 aa1.02□□□□□ -2.25
SRP54-207ENST00000555535 PIKFYVEQ9Y2I7 2098 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 TRBV2A0A0J9YWF9 115 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 RNF222A6NCQ9 220 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 A6NIZ1 184 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 DDX39AO00148 427 aaKnown RBP1.01□□□□□ -2.25
SRP54-207ENST00000555535 GNA14O95837 355 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 OLFM2O95897 454 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 MBD3O95983 291 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 RBMY1CP0DJD4 496 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 PPIAL4GP0DN37 164 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 RALAP11233 206 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 ETS1P14921 441 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 ATP6V1B2P21281 511 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 CALB2P22676 271 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 AHCYP23526 432 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 RDXP35241 583 aaKnown RBP1.01□□□□□ -2.25
SRP54-207ENST00000555535 CYLC1P35663 651 aaPredicted RBP1.01□□□□□ -2.25
SRP54-207ENST00000555535 RAP1BP61224 184 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 OSTNP61366 133 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 GABPB1Q06547 395 aaPredicted RBP1.01□□□□□ -2.25
SRP54-207ENST00000555535 TAF9Q16594 264 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 MAPK6Q16659 721 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 C2orf76Q3KRA6 126 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 C19orf35Q6ZS72 473 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 VPS36Q86VN1 386 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 EFCAB13Q8IY85 973 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 OR56B4Q8NH76 319 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 RAET1EQ8TD07 263 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 FCRL1Q96LA6 429 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 GSDMCQ9BYG8 508 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 NOX3Q9HBY0 568 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 ZNF226Q9NYT6 803 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 CNOT2Q9NZN8 540 aaKnown RBP1.01□□□□□ -2.25
SRP54-207ENST00000555535 KCNN3Q9UGI6 736 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 ZNF222Q9UK12 451 aa1.01□□□□□ -2.25
SRP54-207ENST00000555535 CCDC7Q96M83 1385 aa1□□□□□ -2.25
SRP54-207ENST00000555535 A8MUU9 505 aa1□□□□□ -2.25
SRP54-207ENST00000555535 STX7O15400 261 aaKnown RBP1□□□□□ -2.25
SRP54-207ENST00000555535 PTBP3O95758 552 aaKnown RBP1□□□□□ -2.25
SRP54-207ENST00000555535 TGFAP01135 160 aa1□□□□□ -2.25
SRP54-207ENST00000555535 CD80P33681 288 aa1□□□□□ -2.25
SRP54-207ENST00000555535 NUMBP49757 651 aa1□□□□□ -2.25
SRP54-207ENST00000555535 KPNA2P52292 529 aaKnown RBP1□□□□□ -2.25
SRP54-207ENST00000555535 NTHL1P78549 312 aa1□□□□□ -2.25
SRP54-207ENST00000555535 SNX1Q13596 522 aa1□□□□□ -2.25
SRP54-207ENST00000555535 ARL6IP1Q15041 203 aa1□□□□□ -2.25
SRP54-207ENST00000555535 TRIP10Q15642 601 aa1□□□□□ -2.25
SRP54-207ENST00000555535 CEBPEQ15744 281 aa1□□□□□ -2.25
SRP54-207ENST00000555535 SLC10A5Q5PT55 438 aa1□□□□□ -2.25
SRP54-207ENST00000555535 C11orf71Q6IPW1 123 aa1□□□□□ -2.25
SRP54-207ENST00000555535 TMIGD1Q6UXZ0 262 aa1□□□□□ -2.25
SRP54-207ENST00000555535 MIER3Q7Z3K6 550 aa1□□□□□ -2.25
SRP54-207ENST00000555535 RABEPKQ7Z6M1 372 aa1□□□□□ -2.25
SRP54-207ENST00000555535 TICAM2Q86XR7 235 aa1□□□□□ -2.25
SRP54-207ENST00000555535 RAPGEF5Q92565 580 aa1□□□□□ -2.25
SRP54-207ENST00000555535 RBMXL1Q96E39 390 aaKnown RBP1□□□□□ -2.25
SRP54-207ENST00000555535 EEF2KMTQ96G04 330 aa1□□□□□ -2.25
SRP54-207ENST00000555535 HPDLQ96IR7 371 aa1□□□□□ -2.25
SRP54-207ENST00000555535 HIST1H4GQ99525 98 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms