RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FESP07332 822 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 CYP4B1P13584 511 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ETS2P15036 469 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 TNFRSF1BP20333 461 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 CRHBPP24387 322 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ELK4P28324 431 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 MSX1P28360 303 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 TTKP33981 857 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 EVI2BP34910 448 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 OR1E2P47887 323 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 CLK3P49761 638 aaKnown RBP11.25□□□□□ -0.61
SHMT2-214ENST00000554604 CRISP3P54108 245 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 PRKAG1P54619 331 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 SH3BGRP55822 239 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ESRRGP62508 458 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 TFF3Q07654 80 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 CD47Q08722 323 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 DUSP7Q16829 419 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 SLC25A35Q3KQZ1 300 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 RPS26P11Q5JNZ5 115 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF773Q6PK81 442 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 LACC1Q8IV20 430 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ALDH16A1Q8IZ83 802 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 OR10G2Q8NGC3 310 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 OR4K17Q8NGC6 315 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 PROX1Q92786 737 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 TRIB1Q96RU8 372 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 APOL4Q9BPW4 351 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 SPATA5L1Q9BVQ7 753 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 OR2B2Q9GZK3 357 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 RIBC2Q9H4K1 309 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-214ENST00000554604 SDHAF3Q9NRP4 125 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 PPP4R1LQ9P1A2 415 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 DKKL1Q9UK85 242 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 NDRG4Q9ULP0 352 aaKnown RBP11.25□□□□□ -0.61
SHMT2-214ENST00000554604 COMMD3-BMI1R4GMX3 469 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 PDZD2O15018 2839 aa11.25□□□□□ -0.61
SHMT2-214ENST00000554604 A0A0G2JPF8 293 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 HNRNPCL2B2RXH8 293 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 HNRNPCL3B7ZW38 293 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 DVL2O14641 736 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 HMGN2P05204 90 aaKnown RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 HNRNPCL4P0DMR1 293 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 NR2F1P10589 423 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 JUNBP17275 347 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 BMP5P22003 454 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 TCEA1P23193 301 aaKnown RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 PAX7P23759 505 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 DPP4P27487 766 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SRD5A2P31213 254 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 GABRA3P34903 492 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 TIMP3P35625 211 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CDH12P55289 794 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CXCR4P61073 352 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 TLE4Q04727 773 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SRYQ05066 204 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SYPL1Q16563 259 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 MICAQ29983 383 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 EXOC3L2Q2M3D2 409 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CTU2Q2VPK5 515 aaKnown RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 ZBED5Q49AG3 693 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 DCST1Q5T197 706 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 GALNT5Q7Z7M9 940 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 TSPYL5Q86VY4 417 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 NUP43Q8NFH3 380 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 GPR32P1Q8NGA4 272 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 GPR151Q8TDV0 419 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 XAGE5Q8WWM1 108 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SLC9A6Q92581 669 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 C14orf79Q96F83 325 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 LRRC46Q96FV0 321 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 WDYHV1Q96HA8 205 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 DHRS1Q96LJ7 313 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 LURAP1Q96LR2 239 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SFXN2Q96NB2 322 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 TREX2Q9BQ50 279 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 TUBA1CQ9BQE3 449 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 LMF2Q9BU23 707 aaKnown RBP11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 ACER3Q9NUN7 267 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CALML5Q9NZT1 146 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 ENOPH1Q9UHY7 261 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 FBXL2Q9UKC9 423 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 LIPT1Q9Y234 373 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 POFUT2Q9Y2G5 429 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 SH3GLB1Q9Y371 365 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 GMPPBQ9Y5P6 360 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CEPT1Q9Y6K0 416 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 CSMD1Q96PZ7 3565 aa11.24□□□□□ -0.61
SHMT2-214ENST00000554604 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 CD8B2A6NJW9 211 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 AHCYL1O43865 530 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GADD45GO95257 159 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 IL33O95760 270 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms