RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 BCAS4Q8TDM0 211 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ZNF473Q8WTR7 871 aaKnown RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 PROX1Q92786 737 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 HGDQ93099 445 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 TMCO6Q96DC7 493 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ZMYND19Q96E35 227 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CMTM7Q96FZ5 175 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 NODALQ96S42 347 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CENPKQ9BS16 269 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 PIMREGQ9BSJ6 248 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 EFCAB11Q9BUY7 163 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 TRAF4Q9BUZ4 470 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 OSBPL11Q9BXB4 747 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 MS4A8Q9BY19 250 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ACTR6Q9GZN1 396 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CNOT10Q9H9A5 744 aaKnown RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 FAIMQ9NVQ4 179 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 KLRF1Q9NZS2 232 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 KLHL13Q9P2N7 655 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 IKZF3Q9UKT9 509 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 KCNS2Q9ULS6 477 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CORO1CQ9ULV4 474 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CFL2Q9Y281 166 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 B3GALT5Q9Y2C3 310 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 OARD1Q9Y530 152 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 MAGED1Q9Y5V3 778 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-228ENST00000554592 ABCA1O95477 2261 aa4.3□□□□□ -1.72
ATXN3-228ENST00000554592 CUBNO60494 3623 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 WDR91A4D1P6 747 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 OR6C68A6NDL8 312 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 TMEM247A6NEH6 219 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 WASHC1A8K0Z3 465 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 F5H0A9 414 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 GOLGA8MH3BSY2 632 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SAP18O00422 153 aaKnown RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 ACOX3O15254 700 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 TAPBPO15533 448 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 TCF21O43680 179 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 UGDHO60701 494 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 UGT2B11O75310 529 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SH3BGRLO75368 114 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 STK16O75716 305 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 TTC4O95801 387 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 CD8AP01732 235 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 IGHV4-31P0DP07 118 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PGAM1P18669 254 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PSMB1P20618 241 aaKnown RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 DRD5P21918 477 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 USF1P22415 310 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 DPP4P27487 766 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SERPINB1P30740 379 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 MAGEA3P43357 314 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 XKP51811 444 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 NUDT6P53370 316 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SUCLG1P53597 346 aaKnown RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PGGT1BP53609 377 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SLC12A2P55011 1212 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 DSCR4P56555 118 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 CLDN15P56746 228 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 B3GALT5-AS1P59052 145 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 RPS3AP61247 264 aaKnown RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 UFM1P61960 85 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 IRF8Q02556 426 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PLCXD2Q0VAA5 305 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SLMAPQ14BN4 828 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PON3Q15166 354 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 TRIP13Q15645 432 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SGCBQ16585 318 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PDK4Q16654 411 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 C18orf21Q32NC0 220 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 ZNF672Q499Z4 452 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 CDKL4Q5MAI5 379 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FAM120AOSQ5T036 256 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 NCMAPQ5T1S8 102 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 AGAP6Q5VW22 663 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 KHDRBS2Q5VWX1 349 aaKnown RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 ANKRD22Q5VYY1 191 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 C18orf63Q68DL7 685 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FAM166AQ6J272 317 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FAM45BPQ6NSW5 357 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 MED27Q6P2C8 311 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FRA10AC1Q70Z53 315 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 ADAMTSL2Q86TH1 951 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 CNTN4Q8IWV2 1026 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 UBQLNLQ8IYU4 475 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 RNF10Q8N5U6 811 aaKnown RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 GBP7Q8N8V2 638 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 SNX31Q8N9S9 440 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FNDC9Q8TBE3 224 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FAM45AQ8TCE6 357 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 ADAMTS15Q8TE58 950 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 WIPF2Q8TF74 440 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 MAIP1Q8WWC4 291 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 OMA1Q96E52 524 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 FRG2BQ96QU4 278 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 PINK1Q9BXM7 581 aa4.29□□□□□ -1.72
ATXN3-228ENST00000554592 STMN4Q9H169 189 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-228ENST00000554592 NXF5Q9H1B4 397 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms