RNA–Protein interactions for RNA: ENST00000553521.5

SRSF5-203, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 2,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-203ENST00000553521 TMEM129A0AVI4 362 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 IDH3BO43837 385 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 SCG5P05408 212 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 HSMCR30P0CW71 290 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 ZNF182P17025 639 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 PAICSP22234 425 aaKnown RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 NR4A1P22736 598 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 SPCS2Q15005 226 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 NIPAL3Q6P499 406 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 C6orf15Q6UXA7 325 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 LRRC17Q8N6Y2 441 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 RYDENQ9NUL5 291 aaKnown RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 TEX51A0A1B0GUA7 166 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 A0A1W2PQ72 361 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 CCRL2O00421 344 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 ARPC3O15145 178 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 CSO75390 466 aaKnown RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 FBXO45P0C2W1 286 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 JMJD7P0C870 316 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 HTR3AP46098 478 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 POLR2HP52434 150 aaKnown RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 EGR4Q05215 589 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 ITGADQ13349 1161 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 DYNC1I2Q13409 638 aaKnown RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 QPRTQ15274 297 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 TIMM50Q3ZCQ8 353 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 ZNF362Q5T0B9 420 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 LYPD8Q6UX82 237 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 TMEM234Q8WY98 164 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 ERMAPQ96PL5 475 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 GPX7Q96SL4 187 aaPredicted RBP13.82□□□□□ -0.2
SRSF5-203ENST00000553521 JAM3Q9BX67 310 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 NDEL1Q9GZM8 345 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 MMP25Q9NPA2 562 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 NANSQ9NR45 359 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 TAS2R10Q9NYW0 307 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 CHRNA9Q9UGM1 479 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 HS3ST3B1Q9Y662 390 aa13.82□□□□□ -0.2
SRSF5-203ENST00000553521 SLC22A31A6NKX4 558 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 AIREO43918 545 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 RAB40ALP0C0E4 278 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 COX6A1P12074 109 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 EIF3IQ13347 325 aaKnown RBP13.81□□□□□ -0.2
SRSF5-203ENST00000553521 TOMM34Q15785 309 aaPredicted RBP13.81□□□□□ -0.2
SRSF5-203ENST00000553521 C19orf48Q6RUI8 117 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 GRINAQ7Z429 371 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 CACTIN-AS1Q8N1I8 211 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 PSD4Q8NDX1 1056 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 BBS1Q8NFJ9 593 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 OR5M3Q8NGP4 307 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 OTULINQ96BN8 352 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 KLHDC3Q9BQ90 382 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 SDHAF3Q9NRP4 125 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 HIF3AQ9Y2N7 669 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 PCDHGA3Q9Y5H0 932 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 ANKUB1A6NFN9 424 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 FAM183AA6NL82 134 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 LRRN3E7EW58 273 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 SOCS6O14544 535 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 PLD2O14939 933 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 OR2J2O76002 312 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 MSX1P28360 303 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 RPL4P36578 427 aaKnown RBP13.81□□□□□ -0.2
SRSF5-203ENST00000553521 ETV1P50549 477 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 MLLT11Q13015 90 aaPredicted RBP13.81□□□□□ -0.2
SRSF5-203ENST00000553521 COL28A1Q2UY09 1125 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 C10orf53Q8N6V4 93 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 SLC37A3Q8NCC5 494 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 PTP4A1Q93096 173 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 ISYNA1Q9NPH2 558 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 NRIP3Q9NQ35 241 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 PISDQ9UG56 409 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 ZNF229Q9UJW7 825 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 SLC6A5Q9Y345 797 aa13.81□□□□□ -0.2
SRSF5-203ENST00000553521 RALGAPA1Q6GYQ0 2036 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 SLC25A12O75746 678 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 DLGAP3O95886 979 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 GADD45AP24522 165 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 ATP6V1E1P36543 226 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 CLK1P49759 484 aaKnown RBP13.8□□□□□ -0.2
SRSF5-203ENST00000553521 NTRK2Q16620 822 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 TSTQ16762 297 aaKnown RBP13.8□□□□□ -0.2
SRSF5-203ENST00000553521 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 C5orf46Q6UWT4 87 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 LSRQ86X29 649 aaPredicted RBP13.8□□□□□ -0.2
SRSF5-203ENST00000553521 ST8SIA1Q92185 356 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 OPALINQ96PE5 141 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 TRAV36DV7A0A075B6V5 113 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 CCDC187A0A096LP49 1063 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 MCIDASD6RGH6 385 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 MT-CO3P00414 261 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 IGHA1P01876 353 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
SRSF5-203ENST00000553521 WNT4P56705 351 aa13.8□□□□□ -0.2
SRSF5-203ENST00000553521 SPEM2Q0P670 501 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms