RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RPL36Q9Y3U8 105 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 KDM4EB2RXH2 506 aaPredicted RBP17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 TM4SF5O14894 197 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 GRK5P34947 590 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 GP2P55259 537 aaKnown RBP17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 AADACL4Q5VUY2 407 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 OPN5Q6U736 354 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 GRINAQ7Z429 371 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 SLC43A2Q8N370 569 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 STX19Q8N4C7 294 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 ANKK1Q8NFD2 765 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 KTI12Q96EK9 354 aaPredicted RBP17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 MOGAT1Q96PD6 335 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 IFT27Q9BW83 186 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 MED11Q9P086 117 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF337Q9Y3M9 751 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 WIF1Q9Y5W5 379 aa17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 MRPS18BQ9Y676 258 aaKnown RBP17.77■□□□□ 0.43
RBFOX1-215ENST00000553186 PRODHO43272 600 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 CXCR1P25024 350 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 POLR2HP52434 150 aaKnown RBP17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 FOXK2Q01167 660 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 LTBQ06643 244 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 CHAF1BQ13112 559 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 TUBA3CQ13748 450 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 IRF3Q14653 427 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 IL20RBQ6UXL0 311 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 ADGRG3Q86Y34 549 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 PCNX3Q9H6A9 2034 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 CCDC160A6NGH7 325 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF99A8MXY4 864 aaPredicted RBP17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 CCNA2P20248 432 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 SSR4P51571 173 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 DLX5P56178 289 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 GABREP78334 506 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 TBCEQ15813 527 aaPredicted RBP17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF362Q5T0B9 420 aaPredicted RBP17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 H3F3CQ6NXT2 135 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 POMZP3Q6PJE2 187 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 CYP4Z2PQ8N1L4 340 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 ASB15Q8WXK1 588 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 PLEKHA8Q96JA3 519 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 NPAS1Q99742 590 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 CDCA4Q9BXL8 241 aa17.76■□□□□ 0.43
RBFOX1-215ENST00000553186 TP53I11O14683 189 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 NPIPB7O75200 414 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 NDUFB2O95178 105 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 ASAH2BP0C7U1 165 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 PRKCAP17252 672 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 SLC6A6P31641 620 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 SLC35F1Q5T1Q4 408 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 TMEM81Q6P7N7 255 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 ARSKQ6UWY0 536 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 CCDC81Q6ZN84 652 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 CLVS1Q8IUQ0 354 aaPredicted RBP17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 ADAMTS17Q8TE56 1095 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 ST8SIA1Q92185 356 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 RORBQ92753 470 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 NKD1Q969G9 470 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 TAAR8Q969N4 342 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 FRMD6Q96NE9 622 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 CPNE5Q9HCH3 593 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 SH2D2AQ9NP31 389 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 HINT3Q9NQE9 182 aaKnown RBP17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 CMC2Q9NRP2 79 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 PPP4R1LQ9P1A2 415 aa17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 RSL24D1Q9UHA3 163 aaKnown RBP17.75■□□□□ 0.43
RBFOX1-215ENST00000553186 TMED7-TICAM2A0A0A6YYA0 188 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 ZC3H12DA2A288 527 aaKnown RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 PEPDP12955 493 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 MSX1P28360 303 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 SNTA1Q13424 505 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 INPP5JQ15735 1006 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 GXYLT1Q4G148 440 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 SYT6Q5T7P8 510 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 C1QL3Q5VWW1 255 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 TMEM234Q8WY98 164 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 SECISBP2Q96T21 854 aaKnown RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 NANSQ9NR45 359 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 SDHAF3Q9NRP4 125 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 MRPS18AQ9NVS2 196 aaKnown RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 IL17BQ9UHF5 180 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 BAIAP2Q9UQB8 552 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 TMED7Q9Y3B3 224 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 PCDHGB6Q9Y5F9 930 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 CDRT15L2A8MXV6 281 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 PROB1E7EW31 1015 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 ETV2O00321 342 aaPredicted RBP17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 PPP1R3DO95685 299 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 SERPINA7P05543 415 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 LCKP06239 509 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 DCKP27707 260 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 UBE2UQ5VVX9 321 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 GPR107Q5VW38 600 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 NTNG2Q96CW9 530 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 FN3KQ9H479 309 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 TAS2R16Q9NYV7 291 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 CHRNA9Q9UGM1 479 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 HIF3AQ9Y2N7 669 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms