RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SRSF5Q13243 272 aaKnown RBP9.12□□□□□ -0.95
RAB5B-206ENST00000549505 EFR3AQ14156 821 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 IL11RAQ14626 422 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 PERM1Q5SV97 790 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 ANKRD37Q7Z713 158 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 CENPSQ8N2Z9 138 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 HGDQ93099 445 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 MNTQ99583 582 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 NUDT22Q9BRQ3 303 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 MOKQ9UQ07 419 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 OR10H1Q9Y4A9 318 aa9.12□□□□□ -0.95
RAB5B-206ENST00000549505 HSPB2A8KAH6 182 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SLC30A4O14863 429 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MT-ATP6P00846 226 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 IFNA16P05015 189 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 OR1D4P47884 311 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 ARL4DP49703 201 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 DIO1P49895 249 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF85Q03923 595 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 HSPB2Q16082 182 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CDONQ4KMG0 1287 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CLEC12AQ5QGZ9 265 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 METAP1DQ6UB28 335 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF517Q6ZMY9 492 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 BMPERQ8N8U9 685 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 OR5W2Q8NH69 310 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SETD6Q8TBK2 473 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 STK35Q8TDR2 534 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 PHYHIPQ92561 330 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SDHCQ99643 169 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 HCAR1Q9BXC0 346 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MMP25Q9NPA2 562 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 RPS6KB2Q9UBS0 482 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CLCA3PQ9Y6N3 262 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SZT2Q5T011 3432 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 BGLAPP02818 100 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 HLA-DPB1P04440 258 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 GP1BAP07359 652 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 OR2T7P0C7T2 308 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MTNR1BP49286 362 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 LSM3P62310 102 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MRPL28Q13084 256 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 HLA-BQ31612 363 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CCDC58Q4VC31 144 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 DMKNQ6E0U4 476 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 THOC7Q6I9Y2 204 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 BTLAQ7Z6A9 289 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MEX3DQ86XN8 651 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 APCDD1LQ8NCL9 501 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 OR2T27Q8NH04 317 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 DOK4Q8TEW6 326 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 EDAQ92838 391 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 KCTD7Q96MP8 289 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 UBL7Q96S82 380 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 WDR77Q9BQA1 342 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 RNF167Q9H6Y7 350 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CPNE5Q9HCH3 593 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 QPCTLQ9NXS2 382 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 H2AFY2Q9P0M6 372 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CARD8Q9Y2G2 431 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CPAMD8Q8IZJ3 1885 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 OIP5O43482 229 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SIGLEC6O43699 453 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CDC123O75794 336 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 LALBAP00709 142 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 PAICSP22234 425 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 PGDP52209 483 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SLC26A5P58743 744 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 FABP5Q01469 135 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 COL9A2Q14055 689 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 CRMP1Q14194 572 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 GLYR1Q49A26 553 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SOWAHCQ53LP3 525 aaPredicted RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 PLBD1Q6P4A8 553 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 ZC3H14Q6PJT7 736 aaKnown RBP9.11□□□□□ -0.95
RAB5B-206ENST00000549505 LYSMD2Q8IV50 215 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 IFT27Q9BW83 186 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 SMURF1Q9HCE7 757 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 ZMIZ1Q9ULJ6 1067 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 MAU2Q9Y6X3 613 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 V9GYH0 126 aa9.11□□□□□ -0.95
RAB5B-206ENST00000549505 J3QRK9 145 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 HLA-DQB1P01920 261 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 FUT1P19526 365 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 HTR3AP46098 478 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 TGM4P49221 684 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 CENPAP49450 140 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 RPS25P62851 125 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 CCL7P80098 99 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF117Q03924 483 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 CRYZQ08257 329 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ARHGAP40Q5TG30 622 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 OR2G6Q5TZ20 316 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 UNQ9370/PRO34162Q6UXP9 181 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 TMEM91Q6ZNR0 172 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 PLEKHG7Q6ZR37 379 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 PARP16Q8N5Y8 322 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms