RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CXXC5Q7LFL8 322 aaKnown RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 MAMDC2Q7Z304 686 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 GPALPP1Q8IXQ4 340 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 ARMC10Q8N2F6 343 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 PSD4Q8NDX1 1056 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 NLGN4YQ8NFZ3 816 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 OR11G2Q8NGC1 345 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 OR13C2Q8NGS9 318 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 OR51A7Q8NH64 312 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 THAP3Q8WTV1 239 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 RNF138Q8WVD3 245 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 ASB15Q8WXK1 588 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 MRPL48Q96GC5 212 aaKnown RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 SPRY4Q9C004 299 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 AKIRIN1Q9H9L7 192 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 ISYNA1Q9NPH2 558 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 INPP5EQ9NRR6 644 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 KLRF1Q9NZS2 232 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 PPP4R1LQ9P1A2 415 aa12.26□□□□□ -0.45
PTCH1-215ENST00000547672 SPIN1Q9Y657 262 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-215ENST00000547672 MYL12BO14950 172 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 PRKNO60260 465 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 ACVR2AP27037 513 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 C21orf33P30042 268 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 ETV5P41161 510 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 EIF1P41567 113 aaKnown RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 MAP2K4P45985 399 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 SSR4P51571 173 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 FBXW4P57775 412 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 QPRTQ15274 297 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 TIGD6Q17RP2 521 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 COL28A1Q2UY09 1125 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 STPG1Q5TH74 334 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 GPR139Q6DWJ6 353 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 MEPCEQ7L2J0 689 aaKnown RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 P2RY8Q86VZ1 359 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 TMPRSS12Q86WS5 348 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 RPS19BP1Q86WX3 136 aaKnown RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF248Q8NDW4 579 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 OR4Q3Q8NH05 313 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 CT55Q8WUE5 264 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 C12orf43Q96C57 262 aaKnown RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 RNFT2Q96EX2 444 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 SGCZQ96LD1 299 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 RASL10BQ96S79 203 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 GPX7Q96SL4 187 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-215ENST00000547672 FUNDC2Q9BWH2 189 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 PCDHGB7Q9Y5F8 929 aa12.25□□□□□ -0.45
PTCH1-215ENST00000547672 A0A087WZY1 265 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TMED7-TICAM2A0A0A6YYA0 188 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TMEM200CA6NKL6 621 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 SOCS6O14544 535 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF208O43345 1280 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 ITGA10O75578 1167 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 OR6A2O95222 327 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 CLK1P49759 484 aaKnown RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 GP2P55259 537 aaKnown RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 SPHARQ15513 63 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF74Q16587 644 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF791Q3KP31 576 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 HES3Q5TGS1 186 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 LCN1P1Q5VSP4 162 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TMPRSS11AQ6ZMR5 421 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 GDPGP1Q6ZNW5 385 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 MEX3DQ86XN8 651 aaKnown RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 EGFL6Q8IUX8 553 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 CPOQ8IVL8 374 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TMEM156Q8N614 296 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 NANOGP1Q8N7R0 232 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 OR5M3Q8NGP4 307 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 SGCDQ92629 289 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 FGF11Q92914 225 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TTC28Q96AY4 2481 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 DDIT4LQ96D03 193 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 MRGPRX4Q96LA9 322 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 ERMAPQ96PL5 475 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 JAM3Q9BX67 310 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 LIN28AQ9H9Z2 209 aaKnown RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 MCCC2Q9HCC0 563 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TEKT2Q9UIF3 430 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 ENPP5Q9UJA9 477 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 OSGIN1Q9UJX0 560 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 EXOGQ9Y2C4 368 aaKnown RBP12.24□□□□□ -0.45
PTCH1-215ENST00000547672 HIF3AQ9Y2N7 669 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TMED7Q9Y3B3 224 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 CORINQ9Y5Q5 1042 aa12.24□□□□□ -0.45
PTCH1-215ENST00000547672 TRAV27A0A087WT01 109 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 TMEM129A0AVI4 362 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 ANKRD33BA6NCL7 494 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 C9orf172C9J069 976 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 H3BMQ9 156 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 STMND1H3BQB6 276 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 GNB5O14775 395 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 OIP5O43482 229 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 AHCYL1O43865 530 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 GDF9O60383 454 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 TRIM3O75382 744 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms