RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TGFB1P01137 390 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 IFNGP01579 166 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 RAB3AP20336 220 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 RAB3BP20337 219 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 TRIM23P36406 574 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 CCR8P51685 355 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 NRG3P56975 720 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 SNRPD2P62316 118 aaKnown RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 E2F1Q01094 437 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 TMEM115Q12893 351 aaPredicted RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 C1orf61Q13536 156 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 CAMK2DQ13557 499 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 EXOSC2Q13868 293 aaKnown RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 FGFBP1Q14512 234 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 P2RY14Q15391 338 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 GSG1Q2KHT4 349 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 PGGHGQ32M88 737 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 GUSBP11Q6P575 273 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 Q6ZVL8 140 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 MBOAT2Q6ZWT7 520 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 MEPCEQ7L2J0 689 aaKnown RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 RANBP3LQ86VV4 465 aaPredicted RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 SLC38A6Q8IZM9 456 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 SAMD12Q8N8I0 201 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 KCT2Q8NC54 265 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 CAMKVQ8NCB2 501 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 ZNF248Q8NDW4 579 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 OR4M1Q8NGD0 313 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 FAM174AQ8TBP5 190 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 BRIX1Q8TDN6 353 aaKnown RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 SCARB1Q8WTV0 552 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 ZNF480Q8WV37 535 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 KCNE4Q8WWG9 221 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 NSMAFQ92636 917 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 NUS1Q96E22 293 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 ELP4Q96EB1 424 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 SGTBQ96EQ0 304 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 BMFQ96LC9 184 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 HS6ST2Q96MM7 605 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 ARHGDIGQ99819 225 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 TMED9Q9BVK6 235 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 TCEAL2Q9H3H9 227 aaPredicted RBP9.62□□□□□ -0.87
CHFR-219ENST00000541341 ZCCHC4Q9H5U6 513 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 LDAHQ9H6V9 325 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 WASH6PQ9NQA3 447 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 NANSQ9NR45 359 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 HAO2Q9NYQ3 351 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 FBXL3Q9UKT7 428 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 POMT2Q9UKY4 750 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 SPATA2Q9UM82 520 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 ENTPD4Q9Y227 616 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 HS3ST3A1Q9Y663 406 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 U3KQA8 63 aa9.62□□□□□ -0.87
CHFR-219ENST00000541341 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 A0A1W2PNU3 283 aaPredicted RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 CDHR4A6H8M9 788 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 M0R129 80 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 CREBL2O60519 120 aaPredicted RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 RP2O75695 350 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 B3GALNT1O75752 331 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 AQP8O94778 261 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 APOL3O95236 402 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 HOXC4P09017 264 aaPredicted RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 IFI30P13284 250 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 IFNGR1P15260 489 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 PSMB1P20618 241 aaKnown RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 AGTR1P30556 359 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 MPIP34949 423 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 MNDAP41218 407 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 CCR9P51686 369 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 CLCNKAP51800 687 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 SSBP1Q04837 148 aaKnown RBP9.61□□□□□ -0.87
CHFR-219ENST00000541341 LGALS3BPQ08380 585 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 PUDPQ08623 228 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 SCRN3Q0VDG4 424 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 SGCGQ13326 291 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 FZD2Q14332 565 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 MPPED2Q15777 294 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 UBE2NLQ5JXB2 153 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 OR2G6Q5TZ20 316 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 CDCP2Q5VXM1 449 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 ACSM5Q6NUN0 579 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 SMARCD3Q6STE5 483 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 LYPD8Q6UX82 237 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 ADAMTSL4Q6UY14 1074 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 WASH2PQ6VEQ5 465 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 PGAP1Q75T13 922 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 ABI3BPQ7Z7G0 1075 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 VRK3Q8IV63 474 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 DCUN1D3Q8IWE4 304 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 SYS1Q8N2H4 156 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 STPG2Q8N412 459 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 MEIOBQ8N635 442 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 ZNF527Q8NB42 609 aa9.61□□□□□ -0.87
CHFR-219ENST00000541341 OR4M2Q8NGB6 313 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms