RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SUPT3HO75486 399 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SLU7O95391 586 aaKnown RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 PSMG1O95456 288 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 PNPP00491 289 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TFP02787 698 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 LINGO3P0C6S8 592 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 STMN1P16949 149 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 EDNRAP25101 427 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SHC1P29353 583 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GCH1P30793 250 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 MPIP34949 423 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SFTPDP35247 375 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GP5P40197 560 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ELK3P41970 407 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 PIK3CGP48736 1102 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ALDH9A1P49189 494 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SLC18A2Q05940 514 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 MALLQ13021 153 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 CCNIQ14094 377 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 PDK3Q15120 406 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TRIP10Q15642 601 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ZNHIT3Q15649 155 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ADIPOQQ15848 244 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GABRA6Q16445 453 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GRAMD1BQ3KR37 738 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TMEM176BQ3YBM2 270 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GAGE13Q4V321 117 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 FRG2Q64ET8 278 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 FAM180BQ6P0A1 224 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 METTL2BQ6P1Q9 378 aaKnown RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 FAHD2BQ6P2I3 314 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 CCDC137Q6PK04 289 aaKnown RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 FAM9CQ8IZT9 166 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 PDIK1LQ8N165 341 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 WDR31Q8NA23 367 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 OR7G2Q8NG99 324 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 WDR60Q8WVS4 1066 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 NRG4Q8WWG1 115 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SLC9A6Q92581 669 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 RAB24Q969Q5 203 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 CFAP36Q96G28 342 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 FAHD2AQ96GK7 314 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 FRG2BQ96QU4 278 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ATOH8Q96SQ7 321 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 C1QTNF6Q9BXI9 259 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 SHCBP1LQ9BZQ2 653 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TRIM5Q9C035 493 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 RACGAP1Q9H0H5 632 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 COQ10BQ9H8M1 238 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 CAB39LQ9H9S4 337 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 C3orf14Q9HBI5 128 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 NMRAL1Q9HBL8 299 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 Q9N2J8 555 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 GIMAP4Q9NUV9 329 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 ASB6Q9NWX5 421 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TAS2R16Q9NYV7 291 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 MALT1Q9UDY8 824 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 MOKQ9UQ07 419 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 CHMP2BQ9UQN3 213 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 MTO1Q9Y2Z2 717 aaKnown RBP3.98□□□□□ -1.77
SNHG1-214ENST00000540865 RNF11Q9Y3C5 154 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 TEX264Q9Y6I9 313 aa3.98□□□□□ -1.77
SNHG1-214ENST00000540865 EXPH5Q8NEV8 1989 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 LOC105371242A0A075B767 164 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 IGKV3D-15A0A087WSY6 115 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 IGHV3-15A0A0B4J1V0 119 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 A0A1W2PQD3 144 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 A0A1W2PR80 420 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 CCDC189A1A4V9 331 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 VSTM5A8MXK1 200 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 C9JVG2 144 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 J3QLI3 93 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 PDLIM1O00151 329 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 DNALI1O14645 258 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-214ENST00000540865 CLDN9O95484 217 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 ESRRBO95718 433 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 OXSR1O95747 527 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-214ENST00000540865 OR4A8P0C604 315 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 ANPEPP15144 967 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 PAX7P23759 505 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 PRTN3P24158 256 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 TYK2P29597 1187 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 SLC7A1P30825 629 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 LCN1P31025 176 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 RPS19P39019 145 aaKnown RBP3.97□□□□□ -1.77
SNHG1-214ENST00000540865 SLC1A3P43003 542 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 RFX3P48380 749 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 PRIM2P49643 509 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 PRPS1P60891 318 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 POU3F1Q03052 451 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-214ENST00000540865 TGFBR3Q03167 851 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 GALNT1Q10472 559 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-214ENST00000540865 FOXF1Q12946 379 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 IFT88Q13099 833 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 GTF2H2Q13888 395 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 SLC29A2Q14542 456 aa3.97□□□□□ -1.77
SNHG1-214ENST00000540865 ZKSCAN8Q15776 578 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-214ENST00000540865 GLE1Q53GS7 698 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms