RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 AZIN1O14977 448 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 FCMRO60667 390 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 UGT2B17O75795 530 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 DNAJC8O75937 253 aaPredicted RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 KRT16P08779 473 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 IGFBP1P08833 259 aaPredicted RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 TACSTD2P09758 323 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 MYL2P10916 166 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 APEHP13798 732 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 GIFP27352 417 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 CFPP27918 469 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 PGM1P36871 562 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 CCT3P49368 545 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 MNAT1P51948 309 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 RUNX1T1Q06455 604 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 MERTKQ12866 999 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 EFNB3Q15768 340 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 MAPK14Q16539 360 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 XKR7Q5GH72 579 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 LIPMQ5VYY2 423 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 R3HCC1LQ7Z5L2 792 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 LSRQ86X29 649 aaPredicted RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 CCDC103Q8IW40 242 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 RIMKLAQ8IXN7 391 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 DEPDC4Q8N2C3 294 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 PIGXQ8TBF5 258 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 ADAMTS15Q8TE58 950 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 OIT3Q8WWZ8 545 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 COQ8BQ96D53 544 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 MAGEB18Q96M61 343 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 OR7D2Q96RA2 312 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 PAIP2Q9BPZ3 127 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 PIMREGQ9BSJ6 248 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 THUMPD3Q9BV44 507 aaKnown RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 C1QTNF6Q9BXI9 259 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 PLA2G12AQ9BZM1 189 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 BPESC1Q9GZL8 116 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 ZNF350Q9GZX5 532 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 ADAM19Q9H013 955 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 FKRPQ9H9S5 495 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 MYOZ1Q9NP98 299 aaPredicted RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 CTPS2Q9NRF8 586 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 SLC7A10Q9NS82 523 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 PSMC3IPQ9P2W1 217 aaPredicted RBP6.37□□□□□ -1.39
YBX3-209ENST00000540747 TBK1Q9UHD2 729 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 DCDC2Q9UHG0 476 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 AMDHD2Q9Y303 409 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 HDGFL3Q9Y3E1 203 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 FLVCR1Q9Y5Y0 555 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 ATP23Q9Y6H3 246 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 PMF1-BGLAPU3KQ54 211 aa6.37□□□□□ -1.39
YBX3-209ENST00000540747 CMYA5Q8N3K9 4069 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 IGHV1-18A0A0C4DH31 117 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 A0A1W2PPM1 405 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 CFAP73A6NFT4 308 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TMEM233B4DJY2 109 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 KIAA0513O60268 411 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 LILRA1O75019 489 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 GLRA3O75311 464 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 CRCPO75575 148 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 PDE5AO76074 875 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 C6orf47O95873 294 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TGFAP01135 160 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 FGF4P08620 206 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 LINC00032P0C843 101 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 BMP4P12644 408 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 ITGA2P17301 1181 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 PGCP20142 388 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 HNF1AP20823 631 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 IL2RGP31785 369 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 CRHR1P34998 444 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 HPCAL1P37235 193 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 APOBEC1P41238 236 aaKnown RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 COMPP49747 757 aaPredicted RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 CLK1P49759 484 aaKnown RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 CCR4P51679 360 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 GTF2A1P52655 376 aaPredicted RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 FUT5Q11128 374 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TP53BP2Q13625 1128 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 PTGR1Q14914 329 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 SLC17A1Q14916 467 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 ADIPOQQ15848 244 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TSPO2Q5TGU0 170 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 HHATQ5VTY9 493 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 LIPNQ5VXI9 398 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 DEF8Q6ZN54 512 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 OLIG3Q7RTU3 272 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TRPM8Q7Z2W7 1104 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 ADGRG3Q86Y34 549 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 UBE2J2Q8N2K1 259 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TMCO5AQ8N6Q1 288 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 ZNF614Q8N883 585 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 ZIC4Q8N9L1 334 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 CCDC63Q8NA47 563 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 OR5D16Q8NGK9 328 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 RFWD2Q8NHY2 731 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 MIPOL1Q8TD10 442 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TMEM234Q8WY98 164 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms