RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GIMAP5Q96F15 307 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 C16orf58Q96GQ5 468 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 ARL5BQ96KC2 179 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 GPR78Q96P69 363 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 MRPL37Q9BZE1 423 aaKnown RBP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 BEX1Q9HBH7 125 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 GIN1Q9NXP7 522 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PLEK2Q9NYT0 353 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 TAS2R7Q9NYW3 318 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 TESQ9UGI8 421 aaKnown RBP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF225Q9UK10 706 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 FLVCR1Q9Y5Y0 555 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 A0A096LPE4 126 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 A0A1W2PPZ6 126 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 A6NJY4 79 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 GTPBP1O00178 669 aaKnown RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 MANBAO00462 879 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 TP73O15350 636 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 CDC14BO60729 498 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 GPANK1O95872 356 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 IGKV3-15P01624 115 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 IGHV2-5P01817 119 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 GSNP06396 782 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 TFPIP10646 304 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 GATA3P23771 443 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 NTSP30990 170 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 LCN1P31025 176 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 TIA1P31483 386 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 CCR4P51679 360 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 CDH13P55290 713 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 RAG2P55895 527 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 SESN3P58005 492 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 LOXL3P58215 753 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 UBE2NP61088 152 aaKnown RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 LCN2P80188 198 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 MRPS11P82912 194 aaKnown RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 H3F3AP84243 136 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 SNTB2Q13425 540 aaKnown RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 MAD2L1BPQ15013 274 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 TAF9Q16594 264 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 C3orf36Q3SXR2 165 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 KRT80Q6KB66 452 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 C11orf87Q6NUJ2 197 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF771Q7L3S4 317 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 JAZF1Q86VZ6 243 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 WDFY1Q8IWB7 410 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 CDRT4Q8N9R6 151 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 DEFB108BQ8NET1 73 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 OR1K1Q8NGR3 316 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 OR4F5Q8NH21 305 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 CDC26Q8NHZ8 85 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 BCL2L2Q92843 193 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-206ENST00000535290 RAB39BQ96DA2 213 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 ZHX1-C8orf76Q96EF9 292 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 SYT3Q9BQG1 590 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF416Q9BWM5 594 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 ACPTQ9BZG2 426 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 SHCBP1LQ9BZQ2 653 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 MS4A5Q9H3V2 200 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 TMEM45AQ9NWC5 275 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 PARPBPQ9NWS1 579 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 OXSMQ9NWU1 459 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 GRID1Q9ULK0 1009 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 SNX6Q9UNH7 406 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 CMAHPQ9Y471 501 aa7.07□□□□□ -1.28
CLIP1-206ENST00000535290 ARPC4-TTLL3A0A0A6YYG9 625 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 TCRBV9S1A1TA0A576 114 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 CLPSL1A2RUU4 121 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 FAM159BA6NKW6 160 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 E7ESA3 106 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 C2P06681 752 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ANXA4P09525 319 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 NAT2P11245 290 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 TYK2P29597 1187 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 SPRP35270 261 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 MAGEA8P43361 318 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 EVX1P49640 407 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF75DP51815 510 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 PSMA6P60900 246 aaKnown RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 BTKQ06187 659 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ACSM2AQ08AH3 577 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 MERTKQ12866 999 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 HSPB3Q12988 150 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 DAG1Q14118 895 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 HLXQ14774 488 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 FAM83EQ2M2I3 478 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ATP6AP1LQ52LC2 224 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ARMCX4Q5H9R4 360 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 EXOSC6Q5RKV6 272 aaKnown RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ZNF362Q5T0B9 420 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-206ENST00000535290 SAMD5Q5TGI4 173 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ACSM2BQ68CK6 577 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 FAM71E1Q6IPT2 247 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 REC114Q7Z4M0 266 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 LRP11Q86VZ4 500 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 ZBED8Q8IZ13 594 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 TMCO5AQ8N6Q1 288 aa7.06□□□□□ -1.28
CLIP1-206ENST00000535290 FAM169BQ8N8A8 192 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms