RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 FAAHO00519 579 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 ZNF208O43345 1280 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 EIF1BO60739 113 aaKnown RBP13.66□□□□□ -0.22
CPSF1-211ENST00000533492 TMCC2O75069 709 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 MRPL33O75394 65 aaKnown RBP13.66□□□□□ -0.22
CPSF1-211ENST00000533492 BCHEP06276 602 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 GGT1P19440 569 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 CXCR1P25024 350 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 EDNRAP25101 427 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 MAP2K6P52564 334 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 STX1BP61266 288 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 COPZ1P61923 177 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 SLC35A1P78382 337 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 EPS8Q12929 822 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 LARS2Q15031 903 aaKnown RBP13.66□□□□□ -0.22
CPSF1-211ENST00000533492 PPA1Q15181 289 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 FBXW9Q5XUX1 488 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 CLEC9AQ6UXN8 241 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 Q71RC1 249 aaPredicted RBP13.66□□□□□ -0.22
CPSF1-211ENST00000533492 SSX8Q7RTT4 187 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 CCDC103Q8IW40 242 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 OR9I1Q8NGQ6 314 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 VPS33AQ96AX1 596 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 POM121Q96HA1 1249 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 ARMC7Q9H6L4 198 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 RLIMQ9NVW2 624 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 LAMP3Q9UQV4 416 aa13.66□□□□□ -0.22
CPSF1-211ENST00000533492 FAM234BA2RU67 622 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 ZNF716A6NP11 495 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 H7C1Q1 480 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-211ENST00000533492 IGHV3-9P01782 118 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 GKN3PP0CG01 181 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 MVDP53602 400 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 RPS4XP62701 263 aaKnown RBP13.65□□□□□ -0.22
CPSF1-211ENST00000533492 GTDC1Q4AE62 458 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 TIMM23BQ5SRD1 257 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 ADAM5Q6NVV9 412 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 EPGNQ6UW88 154 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 P2RY8Q86VZ1 359 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 VRK2Q86Y07 508 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 CADM2Q8N3J6 435 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 LRRC8CQ8TDW0 803 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 FBXW5Q969U6 566 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 AURKBQ96GD4 344 aaPredicted RBP13.65□□□□□ -0.22
CPSF1-211ENST00000533492 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 PRDM4Q9UKN5 801 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 USF3Q68DE3 2245 aa13.65□□□□□ -0.22
CPSF1-211ENST00000533492 A0A0G2JPF8 293 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 CDHR4A6H8M9 788 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 DPRXA6NFQ7 191 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 HNRNPCL2B2RXH8 293 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 HNRNPCL3B7ZW38 293 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 SMAD7O15105 426 aaKnown RBP13.64□□□□□ -0.23
CPSF1-211ENST00000533492 HNRNPCL1O60812 293 aaKnown RBP13.64□□□□□ -0.23
CPSF1-211ENST00000533492 TGDSO95455 350 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 HNRNPCL4P0DMR1 293 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 IMPDH2P12268 514 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 NCF2P19878 526 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-211ENST00000533492 COX5AP20674 150 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 SLC16A1P53985 500 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ATP5J2P56134 94 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 LTBQ06643 244 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 BSPH1Q075Z2 132 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 MAPK11Q15759 364 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ZSWIM7Q19AV6 140 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF836Q6ZNA1 936 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF433Q8N7K0 673 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-211ENST00000533492 IGFBPL1Q8WX77 278 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 TMEM19Q96HH6 336 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 C7orf26Q96N11 449 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ADAM19Q9H013 955 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 TCF7L2Q9NQB0 619 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF701Q9NV72 531 aaPredicted RBP13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ASB6Q9NWX5 421 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 UPB1Q9UBR1 384 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 PCDHB14Q9Y5E9 798 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 NAV3Q8IVL0 2385 aa13.64□□□□□ -0.23
CPSF1-211ENST00000533492 ZC3H12DA2A288 527 aaKnown RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 OR5H1A6NKK0 313 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 CLIC1O00299 241 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 RAMP1O60894 148 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 RAD51DO75771 328 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 PGM3O95394 542 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 GPIP06744 558 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 PAX1P15863 534 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 HOXB4P17483 251 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 IDUAP35475 653 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 H3F3AP84243 136 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 FAPQ12884 760 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 RPS26P11Q5JNZ5 115 aaPredicted RBP13.63□□□□□ -0.23
CPSF1-211ENST00000533492 WBP2NLQ6ICG8 309 aa13.63□□□□□ -0.23
CPSF1-211ENST00000533492 SLC2A7Q6PXP3 512 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms