RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ZNF716A6NP11 495 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 VSTM5A8MXK1 200 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 H3BQF6 201 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 PDLIM1O00151 329 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 SLC28A1O00337 649 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 PIP5K1BO14986 540 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 TBX19O60806 448 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 SPAG7O75391 227 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 CYP7B1O75881 506 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 HMGN2P05204 90 aaKnown RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 OR4A8P0C604 315 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 IFNGR1P15260 489 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 MPGP29372 298 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 CCT5P48643 541 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 SLC16A1P53985 500 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 HILS1P60008 231 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 SLC25A3Q00325 362 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 CCNIQ14094 377 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 DCST2Q5T1A1 773 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.08□□□□□ -0.96
COPB1-207ENST00000529866 RNF165Q6ZSG1 346 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 PEG10Q86TG7 708 aaKnown RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 LSRQ86X29 649 aaPredicted RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 OR7A2PQ8NGA2 310 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 AGR3Q8TD06 166 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 TWIST2Q8WVJ9 160 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 WDR60Q8WVS4 1066 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 C3orf30Q96M34 536 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 QRSL1Q9H0R6 528 aaKnown RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 REEP4Q9H6H4 257 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 ZNF696Q9H7X3 374 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 MOV10Q9HCE1 1003 aaKnown RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 FAF1Q9UNN5 650 aaPredicted RBP9.08□□□□□ -0.96
COPB1-207ENST00000529866 TRRAPQ9Y4A5 3859 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 PKD1L1Q8TDX9 2849 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 DYSFO75923 2080 aa9.08□□□□□ -0.96
COPB1-207ENST00000529866 TLDC2A0PJX2 215 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 ANKRD28O15084 1053 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 TRIM13O60858 407 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 RGS9O75916 674 aaPredicted RBP9.07□□□□□ -0.96
COPB1-207ENST00000529866 SLU7O95391 586 aaKnown RBP9.07□□□□□ -0.96
COPB1-207ENST00000529866 PMS2P2O95744 297 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 BCKDHAP12694 445 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 PGCP20142 388 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 FKBP2P26885 142 aaKnown RBP9.07□□□□□ -0.96
COPB1-207ENST00000529866 KHKP50053 298 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 FOXG1P55316 489 aaPredicted RBP9.07□□□□□ -0.96
COPB1-207ENST00000529866 SESN3P58005 492 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 VSNL1P62760 191 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 DEFA6Q01524 100 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 ADIPOQQ15848 244 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 AWAT1Q58HT5 328 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 XKR7Q5GH72 579 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 VHLLQ6RSH7 139 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 ABHD12BQ7Z5M8 362 aaPredicted RBP9.07□□□□□ -0.96
COPB1-207ENST00000529866 ZNF786Q8N393 782 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 OR4F15Q8NGB8 312 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 OR56A1Q8NGH5 318 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 ADAMTS15Q8TE58 950 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 TMEM186Q96B77 213 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 ZNF524Q96C55 264 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 FAM120BQ96EK7 910 aaKnown RBP9.07□□□□□ -0.96
COPB1-207ENST00000529866 SLC38A2Q96QD8 506 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 C1orf50Q9BV19 199 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 LAT2Q9GZY6 243 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 DYNLRB1Q9NP97 96 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 HIF1ANQ9NWT6 349 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 CHRNA9Q9UGM1 479 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 USP22Q9UPT9 525 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 HDGFL3Q9Y3E1 203 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 SPEF1Q9Y4P9 236 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 KCNE3Q9Y6H6 103 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 ARFGEF3Q5TH69 2177 aa9.07□□□□□ -0.96
COPB1-207ENST00000529866 IGHV1-18A0A0C4DH31 117 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 SERINC4A6NH21 518 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 hCG_2039718K7EN88 272 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 SCAMP2O15127 329 aaKnown RBP9.06□□□□□ -0.96
COPB1-207ENST00000529866 SKAP2O75563 359 aaPredicted RBP9.06□□□□□ -0.96
COPB1-207ENST00000529866 NEFHP12036 1026 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 APOBEC1P41238 236 aaKnown RBP9.06□□□□□ -0.96
COPB1-207ENST00000529866 UBE2NP61088 152 aaKnown RBP9.06□□□□□ -0.96
COPB1-207ENST00000529866 NAA20P61599 178 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 RIN1Q13671 783 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 PTGR1Q14914 329 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 TRIP10Q15642 601 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 SPDYE7PQ495Y7 208 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 SHISA2Q6UWI4 295 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 R3HCC1LQ7Z5L2 792 aaKnown RBP9.06□□□□□ -0.96
COPB1-207ENST00000529866 DDIASQ8IXT1 998 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 SVOPLQ8N434 492 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 UBASH3BQ8TF42 649 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 THUMPD3Q9BV44 507 aaKnown RBP9.06□□□□□ -0.96
COPB1-207ENST00000529866 ACTRT3Q9BYD9 372 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 NMUR2Q9GZQ4 415 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 PPCSQ9HAB8 311 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 SLC7A10Q9NS82 523 aa9.06□□□□□ -0.96
COPB1-207ENST00000529866 ACER3Q9NUN7 267 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms