RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 ABCE1P61221 599 aaKnown RBP15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CASP8Q14790 479 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RAB35Q15286 201 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CHRFAM7AQ494W8 412 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CASP12Q6UXS9 341 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ANKRD46Q86W74 232 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ADGRG3Q86Y34 549 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ZNF781Q8N8C0 355 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RAB8BQ92930 207 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 MUS81Q96NY9 551 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 SLC35A5Q9BS91 424 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TMEM109Q9BVC6 243 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 AMBRA1Q9C0C7 1298 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 FKRPQ9H9S5 495 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 SSU72Q9NP77 194 aaKnown RBP15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 UPB1Q9UBR1 384 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 BTNL2Q9UIR0 455 aa15.39■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RTTNQ86VV8 2226 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TMED7-TICAM2A0A0A6YYA0 188 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ELOA3DA6NLF2 546 aaPredicted RBP15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 E7EQL1 145 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 E9PBE3 544 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 H7C417 338 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TM9SF1O15321 606 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 IGHV3-9P01782 118 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 LBPP18428 481 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PAX7P23759 505 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 S100A3P33764 101 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 IDH2P48735 452 aaKnown RBP15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RPL14P50914 215 aaKnown RBP15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 FABP6P51161 128 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ZNF83P51522 516 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 POLR2HP52434 150 aaKnown RBP15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 H3F3AP84243 136 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CHRNEQ04844 493 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 FUT5Q11128 374 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CHI3L2Q15782 390 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 GABRA6Q16445 453 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ELOA3BQ3SY89 546 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 OLIG3Q7RTU3 272 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ELOA3Q8NG57 546 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 OR10H5Q8NGA6 315 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CCDC115Q96NT0 180 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TRNT1Q96Q11 434 aaKnown RBP15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 INPP5KQ9BT40 448 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PIF1Q9H611 641 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TMED7Q9Y3B3 224 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PLCE1Q9P212 2302 aa15.38■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 M0R1B8 84 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PDLIM1O00151 329 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ITM2AO43736 263 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ITGA5P08648 1049 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 SLC1A3P43003 542 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CASP9P55211 416 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 VSNL1P62760 191 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 IRX1P78414 480 aaPredicted RBP15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CHRNB3Q05901 458 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 LOXL1Q08397 574 aaPredicted RBP15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 SPANXN4Q5MJ08 99 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PAQR6Q6TCH4 344 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 LRRC74BQ6ZQY2 392 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ABHD12BQ7Z5M8 362 aaPredicted RBP15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 ZNF440Q8IYI8 595 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 AENQ8WTP8 325 aaKnown RBP15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 WDR60Q8WVS4 1066 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TMEM45BQ96B21 275 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PKNOX2Q96KN3 472 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PPP1R36Q96LQ0 422 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 OR11A1Q9GZK7 315 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TMEM160Q9NX00 188 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 HAO1Q9UJM8 370 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CDC42EP3Q9UKI2 254 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 FLVCR1Q9Y5Y0 555 aa15.37■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 IGHV4-30-2A0A087WSY4 118 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 FAM234BA2RU67 622 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 AGAP5A6NIR3 686 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 HMGN4O00479 90 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 WNT11O96014 354 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CREB1P16220 341 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 SLC1A6P48664 564 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 VLDLRP98155 873 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 FAM174BQ3ZCQ3 159 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 C6orf52Q5T4I8 152 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 OGFOD2Q6N063 350 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 KLHL24Q6TFL4 600 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 TNFRSF13CQ96RJ3 184 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 SF3B5Q9BWJ5 86 aaKnown RBP15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 MTHFD2LQ9H903 347 aaPredicted RBP15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 LPAR3Q9UBY5 353 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 OSGIN1Q9UJX0 560 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PMF1-BGLAPU3KQ54 211 aa15.36■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 WDR91A4D1P6 747 aa15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 CFAP73A6NFT4 308 aa15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RNF212BA8MTL3 300 aa15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RGS16O15492 202 aaPredicted RBP15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 BCAS1O75363 584 aaPredicted RBP15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 DBIP07108 87 aaKnown RBP15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 RPS4Y1P22090 263 aaKnown RBP15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 MPGP29372 298 aa15.35■□□□□ 0.05
CKLF-CMTM1-202ENST00000527845 PHC1P78364 1004 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms