RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ATP23Q9Y6H3 246 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 WNK1Q9H4A3 2382 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 TRAV20A0A0B4J274 112 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 A0A0J9YW62 118 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 EXOC1LA0A1B0GW35 172 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 A0A1W2PS29 197 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 CIB4A0PJX0 185 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF503-AS2A6NEH8 195 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 WASHC1A8K0Z3 465 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF724A8MTY0 619 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 J3QLI3 93 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 M0R1B8 84 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 PDPK1O15530 556 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 RAD51DO75771 328 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TGDSO95455 350 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ANGPTL1O95841 491 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TSPAN15O95858 294 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 MSMBP08118 114 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 NGFRP08138 427 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 DAOP14920 347 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 CHN1P15882 459 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 IGHV1-2P23083 117 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 FPR2P25090 351 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 IL2RGP31785 369 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 SERPINF1P36955 418 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 FEN1P39748 380 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 GP5P40197 560 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ETV1P50549 477 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF83P51522 516 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 MAPK12P53778 367 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 CORO7P57737 925 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 RAC3P60763 192 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 RAB10P61026 200 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 UBA52P62987 128 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TRA2BP62995 288 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 POU4F1Q01851 419 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 SPOCK1Q08629 439 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TRAP1Q12931 704 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 CSTF3Q12996 717 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 PDIA2Q13087 525 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 RIN1Q13671 783 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 FRG1Q14331 258 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNHIT3Q15649 155 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 EFNB3Q15768 340 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 MLANAQ16655 118 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 PLPPR5Q32ZL2 321 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TRMT12Q53H54 448 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF628Q5EBL2 1059 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 CCNYL2Q5T2Q4 361 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 GKAP1Q5VSY0 366 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 FBXW9Q5XUX1 488 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 METTL2BQ6P1Q9 378 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 FAM111BQ6SJ93 734 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 NPSR1Q6W5P4 371 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 RBMS3Q6XE24 437 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 CPLX4Q7Z7G2 160 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZC3HC1Q86WB0 502 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 EPHX4Q8IUS5 362 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF100Q8IYN0 542 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZBED8Q8IZ13 594 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 LILRA2Q8N149 483 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 BPIFB2Q8N4F0 458 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 LINC00469Q8N7U9 141 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ANKS4BQ8N8V4 417 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 C1orf162Q8NEQ5 155 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 OR52N5Q8NH56 324 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 STAG3L4Q8TBR4 150 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 WDR60Q8WVS4 1066 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TSPAN17Q96FV3 270 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 RNF145Q96MT1 663 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF317Q96PQ6 595 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 BBS4Q96RK4 519 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 KCNS3Q9BQ31 491 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 PSD2Q9BQI7 771 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 PLK3Q9H4B4 646 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 UNKLQ9H9P5 680 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 MOV10Q9HCE1 1003 aaKnown RBP4.26□□□□□ -1.73
SDCBP-207ENST00000520168 Q9N2J8 555 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 KCNK9Q9NPC2 374 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 GIMAP4Q9NUV9 329 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 TAS2R16Q9NYV7 291 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 EMC3Q9P0I2 261 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 ATPIF1Q9UII2 106 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 U3KQE9 123 aa4.26□□□□□ -1.73
SDCBP-207ENST00000520168 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A087WV62 115 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A0G2JMP0 313 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A0G2JPF8 293 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A0X1KG70 313 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A1B0GUS0 222 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 A0A1W2PRB8 838 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 SMIM23A6NLE4 172 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 CCT8L1PA6NM43 557 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 SYCE1LA8MT33 242 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 HNRNPCL3B7ZW38 293 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 M0QZ24 198 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 TIMM23O14925 209 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 KCNH1O95259 989 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 GBAP04062 536 aa4.25□□□□□ -1.73
SDCBP-207ENST00000520168 KLK1P06870 262 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms