RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 OR2G6Q5TZ20 316 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 DPY19L2P2Q6ZN68 376 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 OR5M3Q8NGP4 307 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 OR9Q1Q8NGQ5 310 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 OR5W2Q8NH69 310 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 BORCS5Q969J3 196 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 OTULINQ96BN8 352 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 GPX7Q96SL4 187 aaPredicted RBP13.63□□□□□ -0.23
VCAN-211ENST00000513984 ARHGAP9Q9BRR9 750 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 AKIRIN1Q9H9L7 192 aaPredicted RBP13.63□□□□□ -0.23
VCAN-211ENST00000513984 CCDC59Q9P031 241 aaKnown RBP13.63□□□□□ -0.23
VCAN-211ENST00000513984 TNFRSF10DQ9UBN6 386 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 TRBV11-1A0A0K0K1C0 115 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 TMEM200CA6NKL6 621 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 MCIDASD6RGH6 385 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ARPC3O15145 178 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 CDC40O60508 579 aaKnown RBP eCLIP13.62□□□□□ -0.23
VCAN-211ENST00000513984 CCL4P13236 92 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 PGCP20142 388 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 PAICSP22234 425 aaKnown RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 NOS3P29474 1203 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 AVPR2P30518 371 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 P2RX1P51575 399 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 PRPS1P60891 318 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ISXQ2M1V0 245 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 PLA2G2CQ5R387 149 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 FCRLBQ6BAA4 426 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 CROCCP3Q8IVE0 287 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 MISPQ8IVT2 679 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 OR52N1Q8NH53 320 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 TM9SF4Q92544 642 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 NACC2Q96BF6 587 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ERMAPQ96PL5 475 aaPredicted RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 RNF167Q9H6Y7 350 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ERVK13-1Q9NX77 482 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 KLHL21Q9UJP4 597 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 STUB1Q9UNE7 303 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 WDR87Q6ZQQ6 2873 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 FRYLO94915 3013 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 DMDP11532 3685 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 SCO2O43819 266 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ZNF354AO60765 605 aaPredicted RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 NAGAP17050 411 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 PSMA1P25786 263 aaKnown RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 CCKBRP32239 447 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 OPRL1P41146 370 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 CRYBB2P43320 205 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 RPS3AP61247 264 aaKnown RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 ACSM1Q08AH1 577 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 TPBGQ13641 420 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 CBFBQ13951 182 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 ANKDD1AQ495B1 522 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 LIPKQ5VXJ0 399 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 FAM198BQ6UWH4 519 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 C16orf47Q6ZP98 133 aaPredicted RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 LHFPL3Q86UP9 236 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 OR51G2Q8NGK0 314 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 OR5L2Q8NGL0 311 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 RNF138Q8WVD3 245 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 SECISBP2Q96T21 854 aaKnown RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 TEAD3Q99594 435 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 NRIP3Q9NQ35 241 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 HAO2Q9NYQ3 351 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 HIF3AQ9Y2N7 669 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 SPIN1Q9Y657 262 aaPredicted RBP13.62□□□□□ -0.23
VCAN-211ENST00000513984 A3GALT2U3KPV4 340 aa13.62□□□□□ -0.23
VCAN-211ENST00000513984 LOC102723996A0A087X1L8 192 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 LNP1A1A4G5 178 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 ZC3H12DA2A288 527 aaKnown RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 METTL15A6NJ78 407 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 IDH3BO43837 385 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 KLK3P07288 261 aaPredicted RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 ASAH2BP0C7U1 165 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 HIST1H1CP16403 213 aaKnown RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 ITPKBP27987 946 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 CD79BP40259 229 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 TOMM34Q15785 309 aaPredicted RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 KLHL12Q53G59 568 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 ZNF517Q6ZMY9 492 aaPredicted RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 IGFN1Q86VF2 1251 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 KLHL36Q8N4N3 616 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 SLC15A4Q8N697 577 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 ACBD7Q8N6N7 88 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 OR6Q1Q8NGQ2 317 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 RHBDD1Q8TEB9 315 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 GATAD2BQ8WXI9 593 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 HGDQ93099 445 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 C8orf44Q96CB5 159 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 MOGAT1Q96PD6 335 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 NXF2Q9GZY0 626 aaKnown RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 AKIP1Q9NQ31 210 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 NANSQ9NR45 359 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 GPN3Q9UHW5 284 aaPredicted RBP13.61□□□□□ -0.23
VCAN-211ENST00000513984 IER3IP1Q9Y5U9 82 aa13.61□□□□□ -0.23
VCAN-211ENST00000513984 B4E171 279 aa13.6□□□□□ -0.23
VCAN-211ENST00000513984 TSPAN19P0C672 248 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms