RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PISDQ9UG56 409 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC7A8Q9UHI5 535 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 PHF11Q9UIL8 331 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SPATA2Q9UM82 520 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SCML2Q9UQR0 700 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 RASD1Q9Y272 281 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 N6AMT1Q9Y5N5 214 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CLSPNQ9HAW4 1339 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 METP08581 1390 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 NINLQ9Y2I6 1382 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 E9PAM4 449 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 L7N2F9 121 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 CASC3O15234 703 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 HCN1O60741 890 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 TOM1O60784 492 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 NOL4O94818 638 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 IGHV3-9P01782 118 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 FTH1P02794 183 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 RALBP11234 206 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ATP1B2P14415 290 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 IFNA8P32881 189 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ELK3P41970 407 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 MAGEA1P43355 309 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 DAP3P51398 398 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 DUSP3P51452 185 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 HSPA2P54652 639 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 TGFBIQ15582 683 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 PPP1R3AQ16821 1122 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 FHL5Q5TD97 284 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 WSCD1Q658N2 575 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 LRRC66Q68CR7 880 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 TTC19Q6DKK2 380 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 RFWD3Q6PCD5 774 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 CLEC2AQ6UVW9 174 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 HSDL2Q6YN16 418 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 SERPINA9Q86WD7 417 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 PSTKQ8IV42 348 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ERI1Q8IV48 349 aaKnown RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 BPIFCQ8NFQ6 507 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR1L6Q8NGR2 347 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR9A4Q8NGU2 314 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 FAF2Q96CS3 445 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 NUS1Q96E22 293 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZBED6CLQ96FA7 236 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 TECTBQ96PL2 329 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 IL4I1Q96RQ9 567 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 MAPKAP1Q9BPZ7 522 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ELOVL4Q9GZR5 314 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 RHBGQ9H310 441 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 SMYD3Q9H7B4 428 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMEM185BQ9H7F4 350 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 SUDS3Q9H7L9 328 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 NMRAL1Q9HBL8 299 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF160Q9HCG1 818 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 NT5MQ9NPB1 228 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 CUTCQ9NTM9 273 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 NUDT15Q9NV35 164 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 IMPAD1Q9NX62 359 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 SIGLEC8Q9NYZ4 499 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF581Q9P0T4 197 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 PITPNC1Q9UKF7 332 aa3.16□□□□□ -1.9
TRAPPC13-209ENST00000508304 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 TRDCB7Z8K6 153 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 SPECC1L-ADORA2AF8WAN1 911 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 SULT2B1O00204 365 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PSTPIP1O43586 416 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 CXCL13O43927 109 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PRKYO43930 277 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF354AO60765 605 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 UPK3AO75631 287 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 OXSR1O95747 527 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 GNA14O95837 355 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 P04436 131 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 SERPIND1P05546 499 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 CD55P08174 381 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 HCKP08631 526 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 UMPSP11172 480 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 KLK2P20151 261 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 HLCSP50747 726 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PRKXP51817 358 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 HMGCS2P54868 508 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 CDH6P55285 790 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 RPS15P62841 145 aaKnown RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 KLRB1Q12918 225 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 TMED1Q13445 227 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 SERTAD2Q14140 314 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 SLC15A2Q16348 729 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 TMEM52BQ4KMG9 183 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF506Q5JVG8 444 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 C9orf66Q5T8R8 295 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 LIPNQ5VXI9 398 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 ZNF57Q68EA5 555 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 ENPP6Q6UWR7 440 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 NRMQ8IXM6 262 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 CADM2Q8N3J6 435 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 HTR3CQ8WXA8 447 aa3.15□□□□□ -1.91
TRAPPC13-209ENST00000508304 PEX13Q92968 403 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms