RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
CCDC58-207ENST00000498466 ECHS1P30084 290 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 RYKP34925 604 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 SOAT1P35610 550 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 PPOXP50336 477 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 RPS26P62854 115 aaKnown RBP12.13□□□□□ -0.47
CCDC58-207ENST00000498466 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 ZSWIM7Q19AV6 140 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 OLIG3Q7RTU3 272 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 GRINAQ7Z429 371 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 SGMS2Q8NHU3 365 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 ZFAND2BQ8WV99 257 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 SLC38A2Q96QD8 506 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 PLK3Q9H4B4 646 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 TMEM181Q9P2C4 612 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 PSMC3IPQ9P2W1 217 aaPredicted RBP12.13□□□□□ -0.47
CCDC58-207ENST00000498466 TBK1Q9UHD2 729 aa12.13□□□□□ -0.47
CCDC58-207ENST00000498466 A0A0A6YYJ9 748 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 DUXAA6NLW8 204 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 SLCO1B7G3V0H7 640 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 EIF1BO60739 113 aaKnown RBP12.12□□□□□ -0.47
CCDC58-207ENST00000498466 LILRA1O75019 489 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 PDE5AO76074 875 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
CCDC58-207ENST00000498466 AK1P00568 194 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 EGR1P18146 543 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 MATN1P21941 496 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 PCMT1P22061 227 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 GIFP27352 417 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 SLC1A3P43003 542 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 CLK1P49759 484 aaKnown RBP12.12□□□□□ -0.47
CCDC58-207ENST00000498466 CDH15P55291 814 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
CCDC58-207ENST00000498466 H3F3AP84243 136 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 EFNB3Q15768 340 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 CCDC153Q494R4 210 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 RNF165Q6ZSG1 346 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 NATD1Q8N6N6 113 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 NAA11Q9BSU3 229 aaPredicted RBP12.12□□□□□ -0.47
CCDC58-207ENST00000498466 KATNB1Q9BVA0 655 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 METTL17Q9H7H0 456 aaPredicted RBP12.12□□□□□ -0.47
CCDC58-207ENST00000498466 OXSMQ9NWU1 459 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 TRAPPC4Q9Y296 219 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 SLC35A3Q9Y2D2 325 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 DNAJC15Q9Y5T4 150 aa12.12□□□□□ -0.47
CCDC58-207ENST00000498466 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 PLIN3O60664 434 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
CCDC58-207ENST00000498466 KRT33AO76009 404 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 CPA3P15088 417 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 MAPK1P28482 360 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 PGM1P36871 562 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 DVL1P1P54792 670 aaPredicted RBP12.11□□□□□ -0.47
CCDC58-207ENST00000498466 SLC35A1P78382 337 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 CCNIQ14094 377 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 PTGR1Q14914 329 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 SLC17A1Q14916 467 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 MAPK14Q16539 360 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 ARHGAP11BQ3KRB8 267 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 KANK2Q63ZY3 851 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 UGT2A3Q6UWM9 527 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 ADGRG3Q86Y34 549 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 SEMA6DQ8NFY4 1073 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
CCDC58-207ENST00000498466 PRPF18Q99633 342 aaKnown RBP12.11□□□□□ -0.47
CCDC58-207ENST00000498466 ZNF350Q9GZX5 532 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 GIMAP2Q9UG22 337 aa12.11□□□□□ -0.47
CCDC58-207ENST00000498466 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
CCDC58-207ENST00000498466 hCG_2039718K7EN88 272 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 RIPK2O43353 540 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 PEX11AO75192 247 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 BCAS1O75363 584 aaPredicted RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 IFNGR1P15260 489 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 IDH2P48735 452 aaKnown RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 HBA1P69905 142 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 NAAAQ02083 359 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 TRIP10Q15642 601 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 EMBQ6PCB8 327 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 AAED1Q7RTV5 226 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 C6orf120Q7Z4R8 191 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 ABHD12BQ7Z5M8 362 aaPredicted RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 POMGNT2Q8NAT1 580 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 FAM71CQ8NEG0 241 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 MZB1Q8WU39 189 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 TWIST2Q8WVJ9 160 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 WDR60Q8WVS4 1066 aa12.1□□□□□ -0.47
CCDC58-207ENST00000498466 GCDHQ92947 438 aaPredicted RBP12.1□□□□□ -0.47
CCDC58-207ENST00000498466 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms