RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 BANF1O75531 89 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 APOC3P02656 99 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 LHCGRP22888 699 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SDC4P31431 198 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 IFNGR2P38484 337 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CDKN1AP38936 164 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 DLX5P56178 289 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 POLR2LP62875 67 aaKnown RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 RPL19P84098 196 aaKnown RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SCN1BQ07699 218 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 MESP2Q0VG99 397 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CNTN1Q12860 1018 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PTPRCAPQ14761 206 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 HIST2H2ACQ16777 129 aaPredicted RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ATP6V1FQ16864 119 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CARD16Q5EG05 197 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CARD17Q5XLA6 110 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 C16orf89Q6UX73 402 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 EIF3MQ7L2H7 374 aaKnown RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SHFQ7M4L6 423 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PRICKLE2Q7Z3G6 844 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SERPINA12Q8IW75 414 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 DEFB106AQ8N104 65 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 FBXO39Q8N4B4 442 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ZNF283Q8N7M2 679 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 YIPF7Q8N8F6 280 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 FAM46DQ8NEK8 389 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OR56B1Q8NGI3 324 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OR13F1Q8NGS4 319 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OR10K1Q8NGX5 313 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OR5J2Q8NH18 312 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OR4K15Q8NH41 348 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 BAHD1Q8TBE0 780 aaPredicted RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 TMEM234Q8WY98 164 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OTULINQ96BN8 352 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 RAB3CQ96E17 227 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 C16orf58Q96GQ5 468 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 LCORQ96JN0 433 aaPredicted RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 OR5B2Q96R09 309 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PIGQQ9BRB3 760 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SLC17A9Q9BYT1 436 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ANKRD60Q9BZ19 345 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 P2RY12Q9H244 342 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 IPPKQ9H8X2 491 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 NMNAT1Q9HAN9 279 aaPredicted RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SPAG4Q9NPE6 437 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 KIF25Q9UIL4 384 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 USP22Q9UPT9 525 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CTNND2Q9UQB3 1225 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 BTBD3Q9Y2F9 522 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 GSTK1Q9Y2Q3 226 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ABCA7Q8IZY2 2146 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 A0A0U1RQS6 177 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 A0A1B0GUH1 482 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 NKX6-3A6NJ46 265 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 FZD7O75084 574 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PRAMEF1O95521 474 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 DDAH2O95865 285 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 TNFP01375 233 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ARSBP15848 533 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 RPA2P15927 270 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PCMT1P22061 227 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 EEF1B2P24534 225 aaKnown RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CD82P27701 267 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 AKR1C3P42330 323 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 TGM4P49221 684 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CXCR3P49682 368 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 MMP15P51511 669 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 DEFA1P59665 94 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 DEFA3P59666 94 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 RPS7P62081 194 aaKnown RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 LSM6P62312 80 aaKnown RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SLC6A3Q01959 620 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SLC17A1Q14916 467 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PTPRNQ16849 979 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SCGB2B2Q4G0G5 96 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SLC22A6Q4U2R8 563 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PYY3Q5JQD4 70 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 COLEC12Q5KU26 742 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 FAM102AQ5T9C2 384 aaPredicted RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 HAGHLQ6PII5 290 aaPredicted RBP4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 Q6ZSR6 202 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 KCTD8Q6ZWB6 473 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 APCDD1Q8J025 514 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 FAM58AQ8N1B3 248 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CD200R1Q8TD46 325 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 SEMA4DQ92854 862 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 C3orf49Q96BT1 292 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PERPQ96FX8 193 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 CMTM7Q96FZ5 175 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 RBM15Q96T37 977 aaKnown RBP eCLIP4.22□□□□□ -1.734e-8■■■■■ 42.2
RABGGTB-213ENST00000496055 THTPAQ9BU02 230 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 HDAC8Q9BY41 377 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 PRO1933Q9H354 126 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ZDHHC6Q9H6R6 413 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 MED20Q9H944 212 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 KLHL21Q9UJP4 597 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 COL4A2P08572 1712 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 ATG2BQ96BY7 2078 aa4.22□□□□□ -1.73
RABGGTB-213ENST00000496055 MAP1BP46821 2468 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms