RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ARPC4-TTLL3A0A0A6YYG9 625 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 SLC28A1O00337 649 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 EIF1BO60739 113 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 CRCPO75575 148 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 IGLV1-44P01699 117 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 MSMBP08118 114 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 UROSP10746 265 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 ASMTP46597 345 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 DEFA6Q01524 100 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 CCNIQ14094 377 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 PDCD2Q16342 344 aaPredicted RBP12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 RNF165Q6ZSG1 346 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 FRMD7Q6ZUT3 714 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 MOAP1Q96BY2 351 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 SDF2Q99470 211 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 CTPS2Q9NRF8 586 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 HIF1ANQ9NWT6 349 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 TMEM181Q9P2C4 612 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 TMED5Q9Y3A6 229 aa12.34□□□□□ -0.43
PRPF40A-211ENST00000493468 VSTM5A8MXK1 200 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 POC1B-GALNT4F8VUJ3 575 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 KLF11O14901 512 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 AK1P00568 194 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 CSTAP01040 98 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 TFP02787 698 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 CECR9P0C854 216 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 UBTFL6P0CB48 400 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 NEFHP12036 1026 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 EFNA1P20827 205 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 EPHA1P21709 976 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 CCT3P49368 545 aaKnown RBP12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 TP53BP2Q13625 1128 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 TBRG1Q3YBR2 411 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 ANKRD16Q6P6B7 361 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 EIF3MQ7L2H7 374 aaKnown RBP12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 SFXN5Q8TD22 340 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 MAGEE2Q8TD90 523 aaPredicted RBP12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 ANKRD27Q96NW4 1050 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 OR7D2Q96RA2 312 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 PIF1Q9H611 641 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 ATP6V1HQ9UI12 483 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 KCNE5Q9UJ90 142 aa12.33□□□□□ -0.44
PRPF40A-211ENST00000493468 CYP7B1O75881 506 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 GSTA1P08263 222 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 IGFBP1P08833 259 aaPredicted RBP12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 NPR2P20594 1047 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 CALCRP30988 508 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 HPCAL1P37235 193 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 RPL3P39023 403 aaKnown RBP12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 OR2B6P58173 313 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 SLC35A1P78382 337 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 ADRM1Q16186 407 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 AP1ARQ63HQ0 302 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 VHLLQ6RSH7 139 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 PAQR6Q6TCH4 344 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 SVOPLQ8N434 492 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 OR1K1Q8NGR3 316 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 OR51F2Q8NH61 342 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 CLHC1Q8NHS4 586 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 OR5P2Q8WZ92 322 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 NAA11Q9BSU3 229 aaPredicted RBP12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 OR11A1Q9GZK7 315 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 KCNF1Q9H3M0 494 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 TNFRSF12AQ9NP84 129 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 DYNLRB1Q9NP97 96 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 TMEM45AQ9NWC5 275 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 BAIAP2L1Q9UHR4 511 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 PCDHGB4Q9UN71 923 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
PRPF40A-211ENST00000493468 CENPVL1A0A0U1RR11 272 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 TMEM129A0AVI4 362 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 SCAMP2O15127 329 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 ZNF208O43345 1280 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 STX11O75558 287 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 UGT2B17O75795 530 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 RGS9O75916 674 aaPredicted RBP12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 GUSBP08236 651 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 PGM1P36871 562 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 RPL38P63173 70 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 IL1RL1Q01638 556 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 HGFACQ04756 655 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 RFTN2Q52LD8 501 aaPredicted RBP12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 ADGRG3Q86Y34 549 aa12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
PRPF40A-211ENST00000493468 NATD1Q8N6N6 113 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms