RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TIMM10BQ9Y5J6 103 aa2.79□□□□□ -1.96
CLK1-213ENST00000492793 V9GY05 133 aa2.79□□□□□ -1.96
CLK1-213ENST00000492793 THSD7BQ9C0I4 1608 aa2.79□□□□□ -1.96
CLK1-213ENST00000492793 PHF3Q92576 2039 aaKnown RBP2.78□□□□□ -1.96
CLK1-213ENST00000492793 IDSB3KWA1 339 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 F5H6K3 240 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 MBTPS2O43462 519 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 KLF8O95600 359 aaPredicted RBP2.78□□□□□ -1.96
CLK1-213ENST00000492793 IGHV3-48P01763 117 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 HPNP05981 417 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 DUX4L4P0CJ87 422 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 PCMT1P22061 227 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 COX7A1P24310 79 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 GNA11P29992 359 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 CALCRP30988 508 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 KRTAP10-3P60369 221 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 KLRC3Q07444 240 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 NSDHLQ15738 373 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 DPYSL2Q16555 572 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 EXOC3L2Q2M3D2 409 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 NSUN5P1Q3KNT7 163 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 C1orf146Q5VVC0 180 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 Q6ZN92 141 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 UTS2BQ765I0 119 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 PPP1R42Q7Z4L9 355 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 SLC34A3Q8N130 599 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 Q8N7P7 452 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 FANK1Q8TC84 345 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 DNAJA4Q8WW22 397 aaPredicted RBP2.78□□□□□ -1.96
CLK1-213ENST00000492793 PIGCQ92535 297 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 FRAT1Q92837 279 aaPredicted RBP2.78□□□□□ -1.96
CLK1-213ENST00000492793 TIMD4Q96H15 378 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 CLCC1Q96S66 551 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 PLEKHF1Q96S99 279 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 NPAS2Q99743 824 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 ARHGDIGQ99819 225 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 CCT7Q99832 543 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 RAB34Q9BZG1 259 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 SH2D2AQ9NP31 389 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 AIG1Q9NVV5 245 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 SMPD3Q9NY59 655 aaPredicted RBP2.78□□□□□ -1.96
CLK1-213ENST00000492793 HOXC10Q9NYD6 342 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 BFARQ9NZS9 450 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 CDH9Q9ULB4 789 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 STAP1Q9ULZ2 295 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 SLCO1B1Q9Y6L6 691 aa2.78□□□□□ -1.96
CLK1-213ENST00000492793 RPAP1Q9BWH6 1393 aaPredicted RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 PLEKHH1Q9ULM0 1364 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 A0A0G2JRQ6 117 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 IQANK1A0A1B0GTG1 560 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 A6NIZ1 184 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 PCP4L1A6NKN8 68 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 A8MXQ7 604 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 MPHOSPH10O00566 681 aaKnown RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 SNNO75324 88 aaPredicted RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 OXSR1O95747 527 aaPredicted RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 IGLV1-47P01700 117 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 GIPP09681 153 aaPredicted RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 DBTP11182 482 aaKnown RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 NCK1P16333 377 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 COX5AP20674 150 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 CALRP27797 417 aaKnown RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 GPM6AP51674 278 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 HNRNPA3P51991 378 aaKnown RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 PRPS1P60891 318 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 RAP1BP61224 184 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 TGFBR3Q03167 851 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 NCBP1Q09161 790 aaKnown RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 RIPK1Q13546 671 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 PDK3Q15120 406 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 OTPQ5XKR4 325 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 TIGD3Q6B0B8 471 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 CASC1Q6TDU7 716 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 Q6ZPB1 254 aaPredicted RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 GDPD3Q7L5L3 318 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 OR2L13Q8N349 312 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 DCAF4L2Q8NA75 395 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 OR4K14Q8NGD5 310 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 OR52M1Q8NGK5 317 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 EMG1Q92979 244 aaKnown RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 UCN3Q969E3 161 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 CXorf40BQ96DE9 158 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 TSG101Q99816 390 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 REEP4Q9H6H4 257 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 NHEJ1Q9H9Q4 299 aaPredicted RBP2.77□□□□□ -1.97
CLK1-213ENST00000492793 NANOGQ9H9S0 305 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 FOLH1BQ9HBA9 442 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 APMAPQ9HDC9 416 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 RPS6KB2Q9UBS0 482 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 TMCO1Q9UM00 188 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 ASF1AQ9Y294 204 aa2.77□□□□□ -1.97
CLK1-213ENST00000492793 PTCH1Q13635 1447 aa2.76□□□□□ -1.97
CLK1-213ENST00000492793 USP27XA6NNY8 438 aa2.76□□□□□ -1.97
CLK1-213ENST00000492793 TRIM49D1C9J1S8 452 aa2.76□□□□□ -1.97
CLK1-213ENST00000492793 DCTN6O00399 190 aa2.76□□□□□ -1.97
CLK1-213ENST00000492793 ZNF780AO75290 641 aaPredicted RBP2.76□□□□□ -1.97
CLK1-213ENST00000492793 STAMBPO95630 424 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms