RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PRODHO43272 600 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 RAD1O60671 282 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 SLC2A10O95528 541 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 NUDT14O95848 222 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 GP1BBP13224 206 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 CSRP1P21291 193 aaKnown RBP8.58□□□□□ -1.04
SF3B1-211ENST00000487698 DLSTP36957 453 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 MLLT10P55197 1068 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 MLF1P58340 268 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 IL10RAQ13651 578 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 AADACL4Q5VUY2 407 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 OPN5Q6U736 354 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 RTL4Q6ZR62 310 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 GRINAQ7Z429 371 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 CYP4Z2PQ8N1L4 340 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 ANKK1Q8NFD2 765 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF420Q8TAQ5 688 aaPredicted RBP8.58□□□□□ -1.04
SF3B1-211ENST00000487698 ST8SIA1Q92185 356 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 NTNG2Q96CW9 530 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 MOGAT1Q96PD6 335 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 DOK1Q99704 481 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 IFT27Q9BW83 186 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 FN3KQ9H479 309 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 CPNE5Q9HCH3 593 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 CMC2Q9NRP2 79 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 MRPS18AQ9NVS2 196 aaKnown RBP8.58□□□□□ -1.04
SF3B1-211ENST00000487698 P4HTMQ9NXG6 502 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 TAS2R10Q9NYW0 307 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 KLRF1Q9NZS2 232 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 RSL24D1Q9UHA3 163 aaKnown RBP8.58□□□□□ -1.04
SF3B1-211ENST00000487698 BAIAP2Q9UQB8 552 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 PCDHGB6Q9Y5F9 930 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 CEP250Q9BV73 2442 aa8.58□□□□□ -1.04
SF3B1-211ENST00000487698 C2orf72A6NCS6 295 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 STMND1H3BQB6 276 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 MASP2O00187 686 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 NPIPB7O75200 414 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 NDUFB2O95178 105 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ASAH2BP0C7U1 165 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SLC6A6P31641 620 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CASP3P42574 277 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 POLR2HP52434 150 aaKnown RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 FOXK2Q01167 660 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TMEM44Q2T9K0 475 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF362Q5T0B9 420 aaPredicted RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 RNLSQ5VYX0 342 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 NXNL2Q5VZ03 156 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 H3F3CQ6NXT2 135 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TMPRSS12Q86WS5 348 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 RPS19BP1Q86WX3 136 aaKnown RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ADGRG3Q86Y34 549 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CLVS1Q8IUQ0 354 aaPredicted RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 DND1Q8IYX4 353 aaKnown RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 STX19Q8N4C7 294 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ADAMTS17Q8TE56 1095 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 FCGR1BQ92637 280 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 RORBQ92753 470 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ISOC1Q96CN7 298 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 KTI12Q96EK9 354 aaPredicted RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 GPX7Q96SL4 187 aaPredicted RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SECISBP2Q96T21 854 aaKnown RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 METTL7AQ9H8H3 244 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SH2D2AQ9NP31 389 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 HINT3Q9NQE9 182 aaKnown RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CHRNA9Q9UGM1 479 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 HIF3AQ9Y2N7 669 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TMED7-TICAM2A0A0A6YYA0 188 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 LOC101059948A0A1B0GTJ6 334 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CCDC160A6NGH7 325 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 MCIDASD6RGH6 385 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TP53I11O14683 189 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 PPP1R3DO95685 299 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SERPINA7P05543 415 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 LCKP06239 509 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TSPAN19P0C672 248 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ADORA3P0DMS8 318 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 ICAM2P13598 275 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 PRKCAP17252 672 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CXCR1P25024 350 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 MSX1P28360 303 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 HTR3AP46098 478 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SSR4P51571 173 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 LTBQ06643 244 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SNTA1Q13424 505 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 FCRLBQ6BAA4 426 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 OR5M10Q6IEU7 315 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CCDC81Q6ZN84 652 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 C9orf43Q8TAL5 461 aaPredicted RBP8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TMEM234Q8WY98 164 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TAAR8Q969N4 342 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 PTDSS2Q9BVG9 487 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TAPBPLQ9BX59 468 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 CDCP1Q9H5V8 836 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 SDHAF3Q9NRP4 125 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 MED11Q9P086 117 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 PPP4R1LQ9P1A2 415 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms