RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RAB39BQ96DA2 213 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 ZNF416Q9BWM5 594 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 GATA5Q9BWX5 397 aaPredicted RBP7.03□□□□□ -1.28
XRN1-212ENST00000486211 C3orf14Q9HBI5 128 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 FARSBQ9NSD9 589 aaKnown RBP7.03□□□□□ -1.28
XRN1-212ENST00000486211 AURKAIP1Q9NWT8 199 aaPredicted RBP7.03□□□□□ -1.28
XRN1-212ENST00000486211 REV1Q9UBZ9 1251 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 SLC12A4Q9UP95 1085 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 CHMP2BQ9UQN3 213 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
XRN1-212ENST00000486211 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 IGHV2OR16-5A0A0B4J2B6 119 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 M0R233 179 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 PIP5K1BO14986 540 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 FRS3O43559 492 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 PIAS1O75925 651 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 SEC14L2O76054 403 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 NKX2-2O95096 273 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 IGKV3-15P01624 115 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 JUNP05412 331 aaKnown RBP7.02□□□□□ -1.29
XRN1-212ENST00000486211 TYK2P29597 1187 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 MPIP34949 423 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 EVX1P49640 407 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 SEC24CP53992 1094 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 SUMO3P55854 103 aaPredicted RBP7.02□□□□□ -1.29
XRN1-212ENST00000486211 PROK1P58294 105 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 MVKQ03426 396 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 TBRG1Q3YBR2 411 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 ARMCX4Q5H9R4 360 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 C3orf33Q6P1S2 294 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 CASP12Q6UXS9 341 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 SYT10Q6XYQ8 523 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 C9orf139Q6ZV77 190 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 ADGRG3Q86Y34 549 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 WDFY1Q8IWB7 410 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 FAM169BQ8N8A8 192 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 ELP4Q96EB1 424 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 TSPAN17Q96FV3 270 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 RBBP8Q99708 897 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 MRPL37Q9BZE1 423 aaKnown RBP7.02□□□□□ -1.29
XRN1-212ENST00000486211 UBQLN4Q9NRR5 601 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 GIMAP4Q9NUV9 329 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 DDX18Q9NVP1 670 aaKnown RBP7.02□□□□□ -1.29
XRN1-212ENST00000486211 OXSMQ9NWU1 459 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 UPB1Q9UBR1 384 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 RNF14Q9UBS8 474 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 TEX264Q9Y6I9 313 aa7.02□□□□□ -1.29
XRN1-212ENST00000486211 PPIAL4EA0A075B759 164 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 ARPC4-TTLL3A0A0A6YYG9 625 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 PPIAL4CA0A0B4J2A2 164 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 MDFIC2A0A1B0GVS7 189 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 OR6C65A6NJZ3 312 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 TTC36A6NLP5 189 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 VSTM5A8MXK1 200 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 PPIAL4DF5H284 164 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 CCDC188H7C350 402 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 SULT2B1O00204 365 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 NR5A2O00482 541 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 SCDO00767 359 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 KCNK2O95069 426 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 ESRRBO95718 433 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 NUDT14O95848 222 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 GPANK1O95872 356 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 OPN1MWP04001 364 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 PPIAL4FP0DN26 164 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 OPN1MW2P0DN77 364 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 OPN1MW3P0DN78 364 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 STMN1P16949 149 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 JUNBP17275 347 aaPredicted RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 CDH2P19022 906 aaPredicted RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 TIA1P31483 386 aaKnown RBP eCLIP7.01□□□□□ -1.29
XRN1-212ENST00000486211 ALDH3B1P43353 468 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 ATP4BP51164 291 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 P2RX1P51575 399 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 NCBP2P52298 156 aaKnown RBP eCLIP7.01□□□□□ -1.29
XRN1-212ENST00000486211 TUBA1BP68363 451 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 TUBA4AP68366 448 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 CSNK2A1P68400 391 aaPredicted RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 RAE1P78406 368 aaKnown RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 LCN2P80188 198 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 TRAF3Q13114 568 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 PFKFB4Q16877 469 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 C2orf68Q2NKX9 166 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 NDUFAF6Q330K2 333 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 SGO1Q5FBB7 561 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 TUBA1AQ71U36 451 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 JAZF1Q86VZ6 243 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 CCDC103Q8IW40 242 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 OR1K1Q8NGR3 316 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 PIGXQ8TBF5 258 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 GPR151Q8TDV0 419 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 KTI12Q96EK9 354 aaPredicted RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 GPR22Q99680 433 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 QRSL1Q9H0R6 528 aaKnown RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 NELFAQ9H3P2 528 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 MS4A5Q9H3V2 200 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 ACSS3Q9H6R3 686 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 NOL11Q9H8H0 719 aaKnown RBP7.01□□□□□ -1.29
XRN1-212ENST00000486211 TCF7L1Q9HCS4 588 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms