RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 METTL15A6NJ78 407 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ERVPABLB-1P60509 514 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 FAM122CQ6P4D5 195 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 MEX3BQ6ZN04 569 aaKnown RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 BBS1Q8NFJ9 593 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 OCSTAMPQ9BR26 566 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 TIMM29Q9BSF4 260 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF223Q9UK11 482 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NKX6-3A6NJ46 265 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ITGB2P05107 769 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CTSAP10619 480 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 HIST1H1TP22492 207 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 SNCAP37840 140 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 OPRD1P41143 372 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 RAC1P63000 192 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 PM20D1Q6GTS8 502 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 OPN5Q6U736 354 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NPLOC4Q8TAT6 608 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NDNFQ8TB73 568 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 DTD2Q96FN9 168 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 CDK4P11802 303 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 GABRA5P31644 462 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 KIR2DL3P43628 341 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 MLLT11Q13015 90 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 BPHLQ86WA6 291 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 PTERQ96BW5 349 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 UHRF1Q96T88 793 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-212ENST00000480614 METTL9Q9H1A3 318 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 B3GAT1Q9P2W7 334 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 ADAM29Q9UKF5 820 aa8.94□□□□□ -0.98
VEGFA-212ENST00000480614 NSG1A0A0A6YYJ2 146 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 C4orf47A7E2U8 309 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF587BE7ETH6 402 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 RGS11O94810 467 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 F7P08709 466 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 RNF144AP50876 292 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 EGLN3Q9H6Z9 239 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 EBF1Q9UH73 591 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 TIMP1P01033 207 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 CPMP14384 443 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ELK1P19419 428 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 INHBCP55103 352 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 OR7A5Q15622 319 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 YOD1Q5VVQ6 348 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SFRP4Q6FHJ7 346 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SLC15A4Q8N697 577 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF321PQ8N8H1 164 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 FAM3CQ92520 227 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ABCA7Q8IZY2 2146 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 KCNK2O95069 426 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 PLA2G7Q13093 441 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 P2RY14Q15391 338 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 PAN3Q58A45 887 aaKnown RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SLC30A7Q8NEW0 376 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SLAMF9Q96A28 289 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 INPP5KQ9BT40 448 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 NTMT1Q9BV86 223 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 THSD1Q9NS62 852 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF44P15621 663 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 DRD5P21918 477 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 TAGLNQ01995 201 aaKnown RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SIMC1Q8NDZ2 872 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 B3GNT7Q8NFL0 401 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 GORASP2Q9H8Y8 452 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 GNG12Q9UBI6 72 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 GABRA2P47869 451 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 GPR18Q14330 331 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 STEAP3Q658P3 488 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 PSAPL1Q6NUJ1 521 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 NIPAL2Q9H841 368 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SLC23A2Q9UGH3 650 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SSR4P51571 173 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 MTCP1P56278 107 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ACOT4Q8N9L9 421 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 UBQLN4Q9NRR5 601 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 MARCH4Q9P2E8 410 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF225Q9UK10 706 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ZNF891A8MT65 544 aaPredicted RBP8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SLURP2P0DP57 97 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 CLDN6P56747 220 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 CHTF18Q8WVB6 975 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 RTP3Q9BQQ7 232 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SGK494L7N484 410 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 EPHX3Q9H6B9 360 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 SEMA4GQ9NTN9 838 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 KRBOX1C9JBD0 128 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 CHRM4P08173 479 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 MTHFD2P13995 350 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 LACC1Q8IV20 430 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 NPWQ8N729 165 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.93□□□□□ -0.984e-19■□□□□ 8.4
VEGFA-212ENST00000480614 ARNT2Q9HBZ2 717 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 HRASLSQ9HDD0 168 aa8.93□□□□□ -0.98
VEGFA-212ENST00000480614 ISYNA1Q9NPH2 558 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms