RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CLIP4Q8N3C7 705 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 FAM156AQ8NDB6 213 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 PAPD5Q8NDF8 572 aaKnown RBP8.01□□□□□ -1.13
DDX56-211ENST00000479602 POC1BQ8TC44 478 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 STK35Q8TDR2 534 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 LIPHQ8WWY8 451 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 C3orf49Q96BT1 292 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 POM121Q96HA1 1249 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 PRRC1Q96M27 445 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 IL1RAPQ9NPH3 570 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 FANCFQ9NPI8 374 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 DKKL1Q9UK85 242 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 SLC13A4Q9UKG4 626 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 POMPQ9Y244 141 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 TRAPPC4Q9Y296 219 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 HDGFL3Q9Y3E1 203 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 PCNX3Q9H6A9 2034 aa8.01□□□□□ -1.13
DDX56-211ENST00000479602 FREM3P0C091 2139 aa8□□□□□ -1.13
DDX56-211ENST00000479602 A0A087WUJ7 227 aa8□□□□□ -1.13
DDX56-211ENST00000479602 A0A1W2PRQ8 180 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CD8B2A6NJW9 211 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CLDN24A6NM45 220 aa8□□□□□ -1.13
DDX56-211ENST00000479602 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
DDX56-211ENST00000479602 FAM166BA8MTA8 275 aa8□□□□□ -1.13
DDX56-211ENST00000479602 GNB5O14775 395 aa8□□□□□ -1.13
DDX56-211ENST00000479602 GSTA4O15217 222 aa8□□□□□ -1.13
DDX56-211ENST00000479602 TPST1O60507 370 aa8□□□□□ -1.13
DDX56-211ENST00000479602 TPST2O60704 377 aa8□□□□□ -1.13
DDX56-211ENST00000479602 PMS2P2O95744 297 aa8□□□□□ -1.13
DDX56-211ENST00000479602 IFNW1P05000 195 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CRHP06850 196 aa8□□□□□ -1.13
DDX56-211ENST00000479602 FCGR2AP12318 317 aa8□□□□□ -1.13
DDX56-211ENST00000479602 RHCEP18577 417 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CEACAM8P31997 349 aaPredicted RBP8□□□□□ -1.13
DDX56-211ENST00000479602 POLR2HP52434 150 aaKnown RBP8□□□□□ -1.13
DDX56-211ENST00000479602 HMGA2P52926 109 aa8□□□□□ -1.13
DDX56-211ENST00000479602 IST1P53990 364 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CLDN18P56856 261 aa8□□□□□ -1.13
DDX56-211ENST00000479602 SESN3P58005 492 aa8□□□□□ -1.13
DDX56-211ENST00000479602 DGCR6Q14129 220 aa8□□□□□ -1.13
DDX56-211ENST00000479602 MFSD13AQ14CX5 517 aa8□□□□□ -1.13
DDX56-211ENST00000479602 NPTX1Q15818 432 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CTU2Q2VPK5 515 aaKnown RBP8□□□□□ -1.13
DDX56-211ENST00000479602 FBXL19-AS1Q494R0 122 aa8□□□□□ -1.13
DDX56-211ENST00000479602 ANKDD1AQ495B1 522 aa8□□□□□ -1.13
DDX56-211ENST00000479602 RIPPLY2Q5TAB7 128 aa8□□□□□ -1.13
DDX56-211ENST00000479602 EEF1A1P5Q5VTE0 462 aa8□□□□□ -1.13
DDX56-211ENST00000479602 B3GNT6Q6ZMB0 384 aa8□□□□□ -1.13
DDX56-211ENST00000479602 FKBP9P1Q75LS8 142 aa8□□□□□ -1.13
DDX56-211ENST00000479602 GALNT10Q86SR1 603 aa8□□□□□ -1.13
DDX56-211ENST00000479602 GGNQ86UU5 652 aa8□□□□□ -1.13
DDX56-211ENST00000479602 C10orf67Q8IYJ2 551 aa8□□□□□ -1.13
DDX56-211ENST00000479602 ZNF614Q8N883 585 aa8□□□□□ -1.13
DDX56-211ENST00000479602 ADPRHL1Q8NDY3 354 aa8□□□□□ -1.13
DDX56-211ENST00000479602 OR6T1Q8NGN1 323 aa8□□□□□ -1.13
DDX56-211ENST00000479602 SLC26A7Q8TE54 656 aa8□□□□□ -1.13
DDX56-211ENST00000479602 NINJ1Q92982 152 aa8□□□□□ -1.13
DDX56-211ENST00000479602 MCUR1Q96AQ8 359 aa8□□□□□ -1.13
DDX56-211ENST00000479602 SLC47A1Q96FL8 570 aa8□□□□□ -1.13
DDX56-211ENST00000479602 PYURFQ96I23 114 aa8□□□□□ -1.13
DDX56-211ENST00000479602 ZNF347Q96SE7 839 aa8□□□□□ -1.13
DDX56-211ENST00000479602 FOXC2Q99958 501 aa8□□□□□ -1.13
DDX56-211ENST00000479602 TACO1Q9BSH4 297 aaKnown RBP8□□□□□ -1.13
DDX56-211ENST00000479602 UGT2B28Q9BY64 529 aa8□□□□□ -1.13
DDX56-211ENST00000479602 RNF122Q9H9V4 155 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CALHM2Q9HA72 323 aa8□□□□□ -1.13
DDX56-211ENST00000479602 SLC24A3Q9HC58 644 aa8□□□□□ -1.13
DDX56-211ENST00000479602 DLL4Q9NR61 685 aa8□□□□□ -1.13
DDX56-211ENST00000479602 SERINC1Q9NRX5 453 aa8□□□□□ -1.13
DDX56-211ENST00000479602 RLIMQ9NVW2 624 aa8□□□□□ -1.13
DDX56-211ENST00000479602 MED11Q9P086 117 aa8□□□□□ -1.13
DDX56-211ENST00000479602 SPRR3Q9UBC9 169 aa8□□□□□ -1.13
DDX56-211ENST00000479602 CHRNA9Q9UGM1 479 aa8□□□□□ -1.13
DDX56-211ENST00000479602 USP22Q9UPT9 525 aa8□□□□□ -1.13
DDX56-211ENST00000479602 ENPP4Q9Y6X5 453 aa8□□□□□ -1.13
DDX56-211ENST00000479602 MED12Q93074 2177 aa8□□□□□ -1.13
DDX56-211ENST00000479602 ZANQ9Y493 2812 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 LOC102725191A0A1B0GVB3 256 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 A0A1B0GWA3 101 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 TRAPPC13A5PLN9 417 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 MBD3L4A6NDZ8 208 aaPredicted RBP7.99□□□□□ -1.13
DDX56-211ENST00000479602 MBD3L3A6NE82 208 aaPredicted RBP7.99□□□□□ -1.13
DDX56-211ENST00000479602 ARRDC5A6NEK1 342 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 MBD3L5A6NJ08 208 aaPredicted RBP7.99□□□□□ -1.13
DDX56-211ENST00000479602 AP3D1O14617 1153 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 OR2T1O43869 369 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 LYPD3O95274 346 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 STAMBPO95630 424 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 SERPINA1P01009 418 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 RAP2AP10114 183 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 HOXB4P17483 251 aaPredicted RBP7.99□□□□□ -1.13
DDX56-211ENST00000479602 BMP7P18075 431 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 HK1P19367 917 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 ATP6V1B2P21281 511 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 HTR2AP28223 471 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 AQP1P29972 269 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 IFNA8P32881 189 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 TIMP3P35625 211 aa7.99□□□□□ -1.13
DDX56-211ENST00000479602 ACTR3P61158 418 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms