RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CCM2LQ9NUG4 571 aaPredicted RBP18.79■□□□□ 0.6
LIME1-204ENST00000476183 NDUFAF1Q9Y375 327 aa18.79■□□□□ 0.6
LIME1-204ENST00000476183 ZNF716A6NP11 495 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 ZNF724A8MTY0 619 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 RAMP1O60894 148 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 ETS2P15036 469 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 PSMB1P20618 241 aaKnown RBP18.78■□□□□ 0.6
LIME1-204ENST00000476183 LOXP28300 417 aaPredicted RBP18.78■□□□□ 0.6
LIME1-204ENST00000476183 OR2B6P58173 313 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 HOXC5Q00444 222 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 CDK6Q00534 326 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 GUCY1A3Q02108 690 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 SELPLGQ14242 412 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 ZSWIM7Q19AV6 140 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 METTL21CQ5VZV1 264 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 PAMR1Q6UXH9 720 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.78■□□□□ 0.6
LIME1-204ENST00000476183 DHDDSQ86SQ9 333 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 COMTD1Q86VU5 262 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 CCDC103Q8IW40 242 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 CADM2Q8N3J6 435 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 DDIT4LQ96D03 193 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 ACTR6Q9GZN1 396 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 TMEM181Q9P2C4 612 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 TRAPPC4Q9Y296 219 aa18.78■□□□□ 0.6
LIME1-204ENST00000476183 IGKV3D-15A0A087WSY6 115 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 DNPH1O43598 174 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 OR3A2P47893 321 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 ART1P52961 327 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 H3F3AP84243 136 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 BNIP2Q12982 314 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 PDK3Q15120 406 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 TSC22D1Q15714 1073 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 WBP2NLQ6ICG8 309 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 REEP3Q6NUK4 255 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 PIK3IP1Q96FE7 263 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 TMEM38AQ9H6F2 299 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 CACYBPQ9HB71 228 aaKnown RBP18.77■□□□□ 0.6
LIME1-204ENST00000476183 PRSS50Q9UI38 385 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 CORO2BQ9UQ03 480 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 GPR52Q9Y2T5 361 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 VPS13CQ709C8 3753 aa18.77■□□□□ 0.6
LIME1-204ENST00000476183 ZNF469Q96JG9 3925 aaPredicted RBP18.76■□□□□ 0.59
LIME1-204ENST00000476183 EVPLLA8MZ36 301 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 ANGPT2O15123 496 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 ADAP00813 363 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 PPP3CBP16298 524 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 MAP2K6P52564 334 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 COPZ1P61923 177 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 SCARB2Q14108 478 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 SPNS3Q6ZMD2 512 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 GALNT5Q7Z7M9 940 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 TSPEARQ8WU66 669 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 C3orf49Q96BT1 292 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 ZHX1-C8orf76Q96EF9 292 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 ANKRD27Q96NW4 1050 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 HS3ST6Q96QI5 342 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 CGREF1Q99674 301 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 ARMC7Q9H6L4 198 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 FANCFQ9NPI8 374 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 PRDM4Q9UKN5 801 aa18.76■□□□□ 0.59
LIME1-204ENST00000476183 FBP2O00757 339 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 KLF4O43474 513 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 TPST1O60507 370 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 ATE1O95260 518 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 TROVE2P10155 538 aaKnown RBP eCLIP18.75■□□□□ 0.59
LIME1-204ENST00000476183 FPR1P21462 350 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 CXCR1P25024 350 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 PRKAR1BP31321 381 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 NTF4P34130 210 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 ARFIP2P53365 341 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 MTPNP58546 118 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 SLC35A1P78382 337 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 SFRP5Q5T4F7 317 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 PTOV1Q86YD1 416 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 S100PBPQ96BU1 408 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 POTEKPQ9BYX7 375 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 OR10A4Q9H209 315 aa18.75■□□□□ 0.59
LIME1-204ENST00000476183 MED13LQ71F56 2210 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 VIMP08670 466 aaKnown RBP18.74■□□□□ 0.59
LIME1-204ENST00000476183 SLC6A2P23975 617 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 DNASE1P24855 282 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 AQP1P29972 269 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 SLC16A1P53985 500 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 NFYCQ13952 458 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 DHRS4L2Q6PKH6 230 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 Q6ZT83 130 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 ATG4DQ86TL0 474 aaPredicted RBP18.74■□□□□ 0.59
LIME1-204ENST00000476183 PIGXQ8TBF5 258 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 SLC35B4Q969S0 331 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 FOXC2Q99958 501 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 CCDC134Q9H6E4 229 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 EMC3Q9P0I2 261 aa18.74■□□□□ 0.59
LIME1-204ENST00000476183 LIPT2A6NK58 231 aa18.73■□□□□ 0.59
LIME1-204ENST00000476183 TMEM229AB2RXF0 380 aa18.73■□□□□ 0.59
LIME1-204ENST00000476183 RAF1P04049 648 aa18.73■□□□□ 0.59
LIME1-204ENST00000476183 HTR2AP28223 471 aa18.73■□□□□ 0.59
LIME1-204ENST00000476183 CEACAM7Q14002 265 aa18.73■□□□□ 0.59
LIME1-204ENST00000476183 CAPRIN1Q14444 709 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms