RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TBX5Q99593 518 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 NUAK2Q9H093 628 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 DAPL1A0PJW8 107 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 CCDC182A6NF36 153 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 HNRNPCP07910 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 CLUP10909 449 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 ITPKBP27987 946 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 RPS25P62851 125 aaKnown RBP14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 RNF4P78317 190 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 ZNF322Q6U7Q0 402 aaPredicted RBP14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 DPY19L2P2Q6ZN68 376 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 OR10H4Q8NGA5 316 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 OR4K13Q8NH42 304 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
RPUSD3-215ENST00000475470 A0A1W2PQD3 144 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 ALG1L2C9J202 215 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 ALOX12BO75342 701 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 LALBAP00709 142 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 HIST1H1CP16403 213 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 GABRA5P31644 462 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 RGS21Q2M5E4 152 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 CRTC2Q53ET0 693 aaPredicted RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 Q6ZNX1 250 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 OVCH1Q7RTY7 1134 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 TMEM99Q8N816 258 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SDR9C7Q8NEX9 313 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 DEPDC7Q96QD5 511 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 KCNS3Q9BQ31 491 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 ALG8Q9BVK2 526 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 GTPBP2Q9BX10 602 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SIAEQ9HAT2 523 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 APMAPQ9HDC9 416 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SNTG1Q9NSN8 517 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 KLHL21Q9UJP4 597 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 FBXL4Q9UKA2 621 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 YARS2Q9Y2Z4 477 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 CAB39Q9Y376 341 aaPredicted RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SF3B6Q9Y3B4 125 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SPEGQ15772 3267 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 ASCC3Q8N3C0 2202 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 KHNYNO15037 678 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 EIF4E2O60573 245 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 NUDT14O95848 222 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 GYPBP06028 91 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 MRPL3P09001 348 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SLC2A5P22732 501 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 MST1P26927 711 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 TACR3P29371 465 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 RORCP51449 518 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 EMP2P54851 167 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 NRG3P56975 720 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 PRPS1P60891 318 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 ACSM1Q08AH1 577 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 GXYLT1Q4G148 440 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 LRFN5Q96NI6 719 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 TM9SF2Q99805 663 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 NANSQ9NR45 359 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 OCIAD1Q9NX40 245 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 ADAM18Q9Y3Q7 739 aa14.03□□□□□ -0.16
RPUSD3-215ENST00000475470 SAGE2PA6NJ88 616 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 LRRTM2O43300 516 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 IGF2P01344 180 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 CELP19835 753 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 DUSP3P51452 185 aaPredicted RBP14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 PSMD7P51665 324 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 PSPHP78330 225 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 ZNF74Q16587 644 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 KLBQ86Z14 1044 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 TP53INP1Q96A56 240 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 ZNF524Q96C55 264 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 KLHDC3Q9BQ90 382 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 MESP1Q9BRJ9 268 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 ISG20L2Q9H9L3 353 aaKnown RBP14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 INPP5EQ9NRR6 644 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 FAIMQ9NVQ4 179 aa14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 CRNNQ9UBG3 495 aaPredicted RBP14.02□□□□□ -0.16
RPUSD3-215ENST00000475470 BLOC1S5-TXNDC5H3BN57 136 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 SCO2O43819 266 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 SULT1C4O75897 302 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 CDRT1O95170 752 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 PPP5CP53041 499 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 RPS4XP62701 263 aaKnown RBP14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 ATP1A4Q13733 1029 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 TUBA3EQ6PEY2 450 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 ZNF554Q86TJ5 538 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 KCTD7Q96MP8 289 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 NECAB3Q96P71 396 aaPredicted RBP14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 CTRCQ99895 268 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 SEMA4CQ9C0C4 833 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 ADAM19Q9H013 955 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 TPK1Q9H3S4 243 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 ADGRL4Q9HBW9 690 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 GSTK1Q9Y2Q3 226 aa14.02□□□□□ -0.17
RPUSD3-215ENST00000475470 TAF4O00268 1085 aa14.01□□□□□ -0.17
RPUSD3-215ENST00000475470 SYPP08247 313 aa14.01□□□□□ -0.17
RPUSD3-215ENST00000475470 SBK2P0C263 348 aa14.01□□□□□ -0.17
RPUSD3-215ENST00000475470 PGCP20142 388 aa14.01□□□□□ -0.17
RPUSD3-215ENST00000475470 CD40LGP29965 261 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms