RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MAELQ96JY0 434 aaKnown RBP13.5□□□□□ -0.25
VTI1A-203ENST00000472892 TRIM2Q9C040 744 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 OSGIN1Q9UJX0 560 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 PRDM4Q9UKN5 801 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 NOSIPQ9Y314 301 aaKnown RBP13.5□□□□□ -0.25
VTI1A-203ENST00000472892 TMED7Q9Y3B3 224 aa13.5□□□□□ -0.25
VTI1A-203ENST00000472892 USF3Q68DE3 2245 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 OR5H1A6NKK0 313 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 RFXANKO14593 260 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 SLC22A3O75751 556 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 DBIP07108 87 aaKnown RBP13.49□□□□□ -0.25
VTI1A-203ENST00000472892 NR2F1P10589 423 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 KITP10721 976 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 IDO1P14902 403 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 IL7RP16871 459 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 CCNA2P20248 432 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 TACR3P29371 465 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 POLR2HP52434 150 aaKnown RBP13.49□□□□□ -0.25
VTI1A-203ENST00000472892 OR2B6P58173 313 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 GNA13Q14344 377 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 STK11Q15831 433 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 CCDC103Q8IW40 242 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 KBTBD8Q8NFY9 601 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 PNPT1Q8TCS8 783 aaKnown RBP13.49□□□□□ -0.25
VTI1A-203ENST00000472892 MGARPQ8TDB4 240 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 WDR60Q8WVS4 1066 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 ZDHHC16Q969W1 377 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 APH1AQ96BI3 265 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 DNAJA3Q96EY1 480 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 SLC6A13Q9NSD5 602 aa13.49□□□□□ -0.25
VTI1A-203ENST00000472892 FN1P02751 2386 aaKnown RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 TMEM72A0PK05 275 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 EIF1BO60739 113 aaKnown RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 RAMP1O60894 148 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 MRPL33O75394 65 aaKnown RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 IGHV3-9P01782 118 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 THBS1P07996 1170 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 ZCCHC18P0CG32 403 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 IMPDH2P12268 514 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 SLC35A1P78382 337 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 EPS8Q12929 822 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 GSTA3Q16772 222 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 PGGHGQ32M88 737 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 MRPL2Q5T653 305 aaKnown RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 NXNQ6DKJ4 435 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 MAVSQ7Z434 540 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 TLCD1Q96CP7 247 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 DDIT4LQ96D03 193 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 TRMT61AQ96FX7 289 aaKnown RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 MUS81Q96NY9 551 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 GRIP2Q9C0E4 1043 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 SDR39U1Q9NRG7 319 aaPredicted RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 ASB6Q9NWX5 421 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 CISD1Q9NZ45 108 aaKnown RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 ZIM2Q9NZV7 527 aa13.48□□□□□ -0.25
VTI1A-203ENST00000472892 MAGED1Q9Y5V3 778 aaPredicted RBP13.48□□□□□ -0.25
VTI1A-203ENST00000472892 DSPPQ9NZW4 1301 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 ABCA2Q9BZC7 2435 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 CDHR4A6H8M9 788 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 SHISA9B4DS77 424 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 CD8AP01732 235 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 TFPTP0C1Z6 253 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 UQCRBP14927 111 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 MAGOHP61326 146 aaKnown RBP13.47□□□□□ -0.25
VTI1A-203ENST00000472892 TNK1Q13470 666 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 ETFDHQ16134 617 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 MSANTD1Q6ZTZ1 278 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 PEX5LQ8IYB4 626 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 ZNF440Q8IYI8 595 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 OR52P1PQ8NH57 321 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 NAA11Q9BSU3 229 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-203ENST00000472892 TMBIM4Q9HC24 238 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 RLIMQ9NVW2 624 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 PARPBPQ9NWS1 579 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 NKIRAS1Q9NYS0 192 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 TAS2R16Q9NYV7 291 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 CALML5Q9NZT1 146 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
VTI1A-203ENST00000472892 ZANQ9Y493 2812 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 A0A1W2PP18 115 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 CIB4A0PJX0 185 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 ZC3H12DA2A288 527 aaKnown RBP13.46□□□□□ -0.25
VTI1A-203ENST00000472892 PDLIM1O00151 329 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 KLF11O14901 512 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 RAD51DO75771 328 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 ETFAP13804 333 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 IDUAP35475 653 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 ACAA2P42765 397 aaKnown RBP13.46□□□□□ -0.25
VTI1A-203ENST00000472892 CRATP43155 626 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 SLC17A1Q14916 467 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 GABRA6Q16445 453 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 CLEC12BQ2HXU8 276 aa13.46□□□□□ -0.25
VTI1A-203ENST00000472892 OR7E24Q6IFN5 339 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms