RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 STX3Q13277 289 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 PGS1Q32NB8 556 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 ATAD3BQ5T9A4 648 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 IL23RQ5VWK5 629 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 B3GLCTQ6Y288 498 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 C6orf120Q7Z4R8 191 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 KRTCAP2Q8N6L1 136 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 ATP6V1G3Q96LB4 118 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 SORT1Q99523 831 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 THAP1Q9NVV9 213 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 ASIC5Q9NY37 505 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 NKIRAS1Q9NYS0 192 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 MALT1Q9UDY8 824 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 MKLN1Q9UL63 735 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 KCNS2Q9ULS6 477 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 PCDHGB4Q9UN71 923 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 SLC35A3Q9Y2D2 325 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 AMDHD2Q9Y303 409 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 HDGFL3Q9Y3E1 203 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 FKBP7Q9Y680 259 aa12.19□□□□□ -0.46
SEMA3F-208ENST00000470737 MALRD1Q5VYJ5 2156 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 RNF103-CHMP3A0A140T963 221 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 WDR91A4D1P6 747 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 ZNF716A6NP11 495 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 ITM2AO43736 263 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 SNNO75324 88 aaPredicted RBP12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 UGT2B17O75795 530 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 AGR2O95994 175 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 SRD5A1P18405 259 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 HNF1AP20823 631 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 RYKP34925 604 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 CLK1P49759 484 aaKnown RBP12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 PDLIM4P50479 330 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 OR2B6P58173 313 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 HBA1P69905 142 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 TGFBR3Q03167 851 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 BST1Q10588 318 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 MAD2L1Q13257 205 aaPredicted RBP12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 GABRA6Q16445 453 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 ARHGAP11BQ3KRB8 267 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 C6orf136Q5SQH8 315 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 ATG16L1Q676U5 607 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 FAM166AQ6J272 317 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 KLHL24Q6TFL4 600 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 GRINAQ7Z429 371 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 C17orf78Q8N4C9 275 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 OIT3Q8WWZ8 545 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 MUS81Q96NY9 551 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 C20orf27Q9GZN8 174 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 CTPS2Q9NRF8 586 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 PARPBPQ9NWS1 579 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 SLC9A8Q9Y2E8 581 aa12.18□□□□□ -0.46
SEMA3F-208ENST00000470737 HMGB1P1B2RPK0 211 aaPredicted RBP12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 FCMRO60667 390 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 SKAP2O75563 359 aaPredicted RBP12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 BGNP21810 368 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 THBS2P35442 1172 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 SLC16A1P53985 500 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 PHC1P78364 1004 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 HPCAP84074 193 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 GGTLC2Q14390 218 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 KRTAP24-1Q3LI83 254 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 C9orf135Q5VTT2 229 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 ZNF781Q8N8C0 355 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 ANKRD42Q8N9B4 389 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 OR52E4Q8NGH9 312 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 TUBGCP3Q96CW5 907 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 DNAJA3Q96EY1 480 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 ARL5BQ96KC2 179 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 C3orf30Q96M34 536 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 NAA11Q9BSU3 229 aaPredicted RBP12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 CCDC106Q9BWC9 280 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 ZNF350Q9GZX5 532 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 OR51I1Q9H343 314 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 CHODLQ9H9P2 273 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 KCNE5Q9UJ90 142 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 DCTN4Q9UJW0 460 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 WDR45Q9Y484 360 aa12.17□□□□□ -0.46
SEMA3F-208ENST00000470737 CENPVL1A0A0U1RR11 272 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 SLCO1B7G3V0H7 640 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 NDUFS8O00217 210 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 KIAA0513O60268 411 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 EIF1BO60739 113 aaKnown RBP12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 WNT11O96014 354 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 ITGA5P08648 1049 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 CCNA2P20248 432 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 PGM1P36871 562 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 HTR3AP46098 478 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 EMX2Q04743 252 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 OR4F3Q6IEY1 312 aa12.16□□□□□ -0.46
SEMA3F-208ENST00000470737 OLIG3Q7RTU3 272 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms