RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 VDAC3Q9Y277 283 aa7.55□□□□□ -1.2
GTF3A-206ENST00000470606 PTPRQQ9UMZ3 2332 aa7.55□□□□□ -1.2
GTF3A-206ENST00000470606 CACNA1CQ13936 2221 aa7.55□□□□□ -1.2
GTF3A-206ENST00000470606 TRABD2BA6NFA1 517 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 EFCAB9A8MZ26 197 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 EFSO43281 561 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TLX2O43763 284 aaPredicted RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ENTPD6O75354 484 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CLPTM1O96005 669 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CCDC159P0C7I6 412 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PNMTP11086 282 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 LIPCP11150 499 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PGCP20142 388 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TCEA1P23193 301 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 C21orf33P30042 268 aaPredicted RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PCYT1AP49585 367 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 DLX5P56178 289 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CXCR4P61073 352 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SNRPGP62308 76 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 RPS4XP62701 263 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PLPPR5Q32ZL2 321 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 RBM48Q5RL73 367 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SLC27A4Q6P1M0 643 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TMEM81Q6P7N7 255 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PTCHD4Q6ZW05 846 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 OAFQ86UD1 273 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SATL1Q86VE3 508 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 IGFN1Q86VF2 1251 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 MISPQ8IVT2 679 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CLDN22Q8N7P3 220 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 OR5M1Q8NGP8 315 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 FANK1Q8TC84 345 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ARL5BQ96KC2 179 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 GNRHR2Q96P88 292 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 UBL7Q96S82 380 aaPredicted RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 HCAR1Q9BXC0 346 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ANGPTL4Q9BY76 406 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 YTHDF1Q9BYJ9 559 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CPNE5Q9HCH3 593 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 MED17Q9NVC6 651 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 FKBP14Q9NWM8 211 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 GPR83Q9NYM4 423 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 DNAJC27Q9NZQ0 273 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PPP4R1LQ9P1A2 415 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ENOPH1Q9UHY7 261 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PSORS1C1Q9UIG5 152 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 WASF3Q9UPY6 502 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TMED7-TICAM2A0A0A6YYA0 188 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PINLYPA6NC86 204 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 MCIDASD6RGH6 385 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 IMPA2O14732 288 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SURF4O15260 269 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SUSD5O60279 629 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 NEURL1O76050 574 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 OR7A10O76100 309 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ASAH2BP0C7U1 165 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ENDOUP21128 410 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PCMT1P22061 227 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CD96P40200 585 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SLC15A1P46059 708 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 RPS5P46782 204 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ALDH3B2P48448 385 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 MASP1P48740 699 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CDC42P60953 191 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 FOXF1Q12946 379 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CLN3Q13286 438 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SNTA1Q13424 505 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 PGGHGQ32M88 737 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 ZBED5Q49AG3 693 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 NADK2Q4G0N4 442 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SYT14P1Q58G82 188 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TMEM201Q5SNT2 666 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SLC22A10Q63ZE4 541 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 GRINAQ7Z429 371 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 RAB43Q86YS6 212 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SPARTQ8N0X7 666 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 LNX2Q8N448 690 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 FAM26EQ8N5C1 309 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TMEM156Q8N614 296 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 BBS1Q8NFJ9 593 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 MOSPD2Q8NHP6 518 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TEX47Q8TBZ9 253 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 LIPHQ8WWY8 451 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 GGHQ92820 318 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 OSTF1Q92882 214 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SGTBQ96EQ0 304 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SIGLEC12Q96PQ1 595 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 POLDIP3Q9BY77 421 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 MRPS26Q9BYN8 205 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 SLC19A3Q9BZV2 496 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 FAM117AQ9C073 453 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 C12orf10Q9HB07 376 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TBC1D23Q9NUY8 699 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 HPF1Q9NWY4 346 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 IMPAD1Q9NX62 359 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 STMN3Q9NZ72 180 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 CDV3Q9UKY7 258 aaKnown RBP7.54□□□□□ -1.2
GTF3A-206ENST00000470606 TMED7Q9Y3B3 224 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms