RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 ABCA4P78363 2273 aa12.32□□□□□ -0.44
LINC00173-201ENST00000470091 ACANP16112 2415 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 H0YJX3 145 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 DLGAP1O14490 977 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 AP3D1O14617 1153 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 HCN1O60741 890 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 WDR1O75083 606 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 UGT2B11O75310 529 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 TRAPPC6AO75865 159 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 ALPLP05186 524 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 ACADSP16219 412 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 ENDOUP21128 410 aaKnown RBP12.31□□□□□ -0.44
LINC00173-201ENST00000470091 HTR2AP28223 471 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 LCN1P31025 176 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 LIMS1P48059 325 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 HSPA13P48723 471 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 NRG3P56975 720 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 TAS2R41P59536 307 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 PSPHP78330 225 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 C6orf52Q5T4I8 152 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 RANBP3LQ86VV4 465 aaPredicted RBP12.31□□□□□ -0.44
LINC00173-201ENST00000470091 OFCC1Q8IZS5 231 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 SLC15A4Q8N697 577 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 ZNF527Q8NB42 609 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 OR10G2Q8NGC3 310 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 GIPC3Q8TF64 312 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 RBM4BQ9BQ04 359 aaKnown RBP12.31□□□□□ -0.44
LINC00173-201ENST00000470091 FNDC11Q9BVV2 318 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 RBM4Q9BWF3 364 aaKnown RBP12.31□□□□□ -0.44
LINC00173-201ENST00000470091 OSBPL10Q9BXB5 764 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 HOXD1Q9GZZ0 328 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 ARMC7Q9H6L4 198 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 NMNAT1Q9HAN9 279 aaPredicted RBP12.31□□□□□ -0.44
LINC00173-201ENST00000470091 PROK2Q9HC23 129 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 SH2D2AQ9NP31 389 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 UBQLN4Q9NRR5 601 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 AP4B1Q9Y6B7 739 aa12.31□□□□□ -0.44
LINC00173-201ENST00000470091 HRNRQ86YZ3 2850 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 ANKHD1Q8IWZ3 2542 aaKnown RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 LRRC3CA6NJW4 275 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 SCDO00767 359 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 OIP5O43482 229 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 MITFO75030 526 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 PPM1BO75688 479 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 CCNB2O95067 398 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 FBXO45P0C2W1 286 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 UBTFL6P0CB48 400 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 THRBP10828 461 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 UQCRBP14927 111 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 TBXA2RP21731 343 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 UQCRC1P31930 480 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 DAPP51397 102 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 ARHGDIAP52565 204 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 FBXW4P57775 412 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 CD226Q15762 336 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 KLHL26Q53HC5 615 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 ENTPD8Q5MY95 495 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 FNDC7Q5VTL7 733 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 BICRALQ6AI39 1079 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 APOOLQ6UXV4 268 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 LSRQ86X29 649 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 CMIPQ8IY22 773 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 OR9Q2Q8NGE9 314 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 ZNF570Q96NI8 536 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 ALPK1Q96QP1 1244 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 FUZQ9BT04 418 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 LIME1Q9H400 295 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 MAN2C1Q9NTJ4 1040 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 SMPD3Q9NY59 655 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 CNIH4Q9P003 139 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 TMEFF2Q9UIK5 374 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 NPFFR2Q9Y5X5 522 aa12.3□□□□□ -0.44
LINC00173-201ENST00000470091 CHCHD2Q9Y6H1 151 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-201ENST00000470091 FREM3P0C091 2139 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 NAV3Q8IVL0 2385 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 KDM4EB2RXH2 506 aaPredicted RBP12.29□□□□□ -0.44
LINC00173-201ENST00000470091 FAAHO00519 579 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 ADAM11O75078 769 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 CYP7B1O75881 506 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 OR5F1O95221 314 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 NTN1O95631 604 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 SNAP29O95721 258 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 CSTAP01040 98 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 GABRA1P14867 456 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 HPGDP15428 266 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 IGFBP5P24593 272 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 GDF1P27539 372 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 KIR2DL3P43628 341 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 HMGA2P52926 109 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 PNLIPRP2P54317 469 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 SMIM11AP58511 58 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 GK3PQ14409 553 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 SEC23BQ15437 767 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 ZSWIM7Q19AV6 140 aa12.29□□□□□ -0.44
LINC00173-201ENST00000470091 MICAQ29983 383 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms