RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 RTTNQ86VV8 2226 aa16.88■□□□□ 0.29
COL9A3-206ENST00000466532 TMED7-TICAM2A0A0A6YYA0 188 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 GOLGA8QA0A0J9YX86 632 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 GOLGA8OA6NCC3 632 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 GOLGA8NF8WBI6 632 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 THBS1P07996 1170 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 CHRM4P08173 479 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 PTNP21246 168 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 NTF4P34130 210 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 CDKN2CP42773 168 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 ANXA11P50995 505 aaKnown RBP16.87■□□□□ 0.29
COL9A3-206ENST00000466532 SLC16A1P53985 500 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 BST1Q10588 318 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 CEP85LQ5SZL2 805 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 TMEM108Q6UXF1 575 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 LSRQ86X29 649 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-206ENST00000466532 CMIPQ8IY22 773 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 ZBTB9Q96C00 473 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 DDIT4LQ96D03 193 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 RADILQ96JH8 1075 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 MDFIQ99750 246 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 INPP5KQ9BT40 448 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 GRIP2Q9C0E4 1043 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 BARX1Q9HBU1 254 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-206ENST00000466532 TAS2R16Q9NYV7 291 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 MALT1Q9UDY8 824 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 TRAPPC4Q9Y296 219 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 TMED7Q9Y3B3 224 aa16.87■□□□□ 0.29
COL9A3-206ENST00000466532 SONP18583 2426 aaKnown RBP16.86■□□□□ 0.29
COL9A3-206ENST00000466532 A0A1W2PR80 420 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 TMEM72A0PK05 275 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 AGAP5A6NIR3 686 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 SDHDO14521 159 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 CRLF1O75462 422 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 PGRP06401 933 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 IL12AP29459 219 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 ZNF83P51522 516 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 POLR2HP52434 150 aaKnown RBP16.86■□□□□ 0.29
COL9A3-206ENST00000466532 SLC35A1P78382 337 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 AGAP6Q5VW22 663 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 KLHL17Q6TDP4 642 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 CASP12Q6UXS9 341 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 LRRC74BQ6ZQY2 392 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 ZNF621Q6ZSS3 439 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 SPATA19Q7Z5L4 167 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 PMM1Q92871 262 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 OR52E6Q96RD3 313 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 PARD6BQ9BYG5 372 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 OSGIN1Q9UJX0 560 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 POU2F3Q9UKI9 436 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 MGAT4BQ9UQ53 548 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 B3GALT5Q9Y2C3 310 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 SLC25A15Q9Y619 301 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 ALPK2Q86TB3 2170 aa16.86■□□□□ 0.29
COL9A3-206ENST00000466532 ZNF208O43345 1280 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 TP53P04637 393 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-206ENST00000466532 GSNP06396 782 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 IMPDH2P12268 514 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 IL7RP16871 459 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 PTAFRP25105 342 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 TACR3P29371 465 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 FOXG1P55316 489 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-206ENST00000466532 TXNL4AP83876 142 aaKnown RBP16.85■□□□□ 0.29
COL9A3-206ENST00000466532 H3F3AP84243 136 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 SPOCK1Q08629 439 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 LRRC74AQ0VAA2 488 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 GNA13Q14344 377 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 GABRA6Q16445 453 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 NRF1Q16656 503 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 TNFAIP8L3Q5GJ75 292 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 COX20Q5RI15 118 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 OR7E24Q6IFN5 339 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 SLC22A25Q6T423 547 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 DNM1P46Q6ZS02 220 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 OR52E4Q8NGH9 312 aa16.85■□□□□ 0.29
COL9A3-206ENST00000466532 PNPT1Q8TCS8 783 aaKnown RBP16.85■□□□□ 0.29
COL9A3-206ENST00000466532 NAA11Q9BSU3 229 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-206ENST00000466532 MTHFD2LQ9H903 347 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-206ENST00000466532 E7EQL1 145 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 M0R1B8 84 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 FAAHO00519 579 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 SSX4O60224 188 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 EIF1BO60739 113 aaKnown RBP16.84■□□□□ 0.29
COL9A3-206ENST00000466532 DBIP07108 87 aaKnown RBP16.84■□□□□ 0.29
COL9A3-206ENST00000466532 ITGA5P08648 1049 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 NR2F1P10589 423 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 UQCRBP14927 111 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 RPS4Y1P22090 263 aaKnown RBP16.84■□□□□ 0.29
COL9A3-206ENST00000466532 CD40P25942 277 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 EPHA3P29320 983 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 SLC1A3P43003 542 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 MRPL2Q5T653 305 aaKnown RBP16.84■□□□□ 0.29
COL9A3-206ENST00000466532 HHATQ5VTY9 493 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 ANKRD42Q8N9B4 389 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 MUS81Q96NY9 551 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 ZBTB18Q99592 522 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 CACNG6Q9BXT2 260 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 PARPBPQ9NWS1 579 aa16.84■□□□□ 0.29
COL9A3-206ENST00000466532 UPB1Q9UBR1 384 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms