RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 IGHV1-18A0A0C4DH31 117 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 DUXAA6NLW8 204 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 TMEM114B3SHH9 223 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 SCAMP2O15127 329 aaKnown RBP12.59□□□□□ -0.39
SMC1A-204ENST00000463684 CFLARO15519 480 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 STX11O75558 287 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 KRT33AO76009 404 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 URI1O94763 535 aaPredicted RBP12.59□□□□□ -0.39
SMC1A-204ENST00000463684 AK1P00568 194 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 LINC00032P0C843 101 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 LAMP1P11279 417 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 BCKDHAP12694 445 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 IFNGR1P15260 489 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 DNAJB13P59910 316 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 H3F3AP84243 136 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 DEF8Q6ZN54 512 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 GLCCI1Q86VQ1 547 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 NATD1Q8N6N6 113 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 SEMA6DQ8NFY4 1073 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 OR5D16Q8NGK9 328 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 PSMA8Q8TAA3 256 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 SFXN5Q8TD22 340 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 WDR60Q8WVS4 1066 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 OR11A1Q9GZK7 315 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 SAP130Q9H0E3 1048 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 ATAD3AQ9NVI7 634 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 TMEM45AQ9NWC5 275 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 MKLN1Q9UL63 735 aa12.59□□□□□ -0.39
SMC1A-204ENST00000463684 B4DSR2 109 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 AZIN1O14977 448 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 LSM1O15116 133 aaKnown RBP12.58□□□□□ -0.4
SMC1A-204ENST00000463684 FCMRO60667 390 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 UGT2B17O75795 530 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 C6orf47O95873 294 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 CREB1P16220 341 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 CCNA2P20248 432 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 GCAP28676 217 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 RYKP34925 604 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 UBE2NP61088 152 aaKnown RBP12.58□□□□□ -0.4
SMC1A-204ENST00000463684 SLC35A1P78382 337 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 LGALS3BPQ08380 585 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 LIPMQ5VYY2 423 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 ADGRG3Q86Y34 549 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF786Q8N393 782 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 POMGNT2Q8NAT1 580 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 OR4F15Q8NGB8 312 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 OR5AK3PQ8NH89 298 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 DDIT4LQ96D03 193 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 BOD1Q96IK1 185 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 PRPF18Q99633 342 aaKnown RBP12.58□□□□□ -0.4
SMC1A-204ENST00000463684 KCNE5Q9UJ90 142 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 SLC35A3Q9Y2D2 325 aa12.58□□□□□ -0.4
SMC1A-204ENST00000463684 TMEM89A2RUT3 159 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 FAM157AC9JC47 383 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 TRIM77I1YAP6 450 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 hCG_2039718K7EN88 272 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 GLRA3O75311 464 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 MATN1P21941 496 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 MAPK1P28482 360 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
SMC1A-204ENST00000463684 CCNIQ14094 377 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 ARHGAP11BQ3KRB8 267 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 ANKRD16Q6P6B7 361 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 SHQ1Q6PI26 577 aaKnown RBP12.57□□□□□ -0.4
SMC1A-204ENST00000463684 RNF165Q6ZSG1 346 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 HOMEZQ8IX15 550 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 CNPY4Q8N129 248 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 UBASH3BQ8TF42 649 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 FAM216AQ8WUB2 273 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 PMM1Q92871 262 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 EMCNQ9ULC0 261 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 PYCARDQ9ULZ3 195 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 PCDHB10Q9UN67 800 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 TENM1Q9UKZ4 2725 aa12.57□□□□□ -0.4
SMC1A-204ENST00000463684 CENPVL1A0A0U1RR11 272 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 SH3PXD2BA1X283 911 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 SKAP2O75563 359 aaPredicted RBP12.56□□□□□ -0.4
SMC1A-204ENST00000463684 PROCP04070 461 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 NPR2P20594 1047 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 SOAT1P35610 550 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 PGM1P36871 562 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 HTR3AP46098 478 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 NAAAQ02083 359 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 RIN1Q13671 783 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 TRIP10Q15642 601 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 ADRM1Q16186 407 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 TBRG1Q3YBR2 411 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 CCDC153Q494R4 210 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 C16orf62Q7Z3J2 963 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 DDIASQ8IXT1 998 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 ZCCHC24Q8N2G6 241 aaKnown RBP12.56□□□□□ -0.4
SMC1A-204ENST00000463684 CCDC63Q8NA47 563 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 OIT3Q8WWZ8 545 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 TMEM45BQ96B21 275 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms