RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SYNDIG1LA6NDD5 238 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 C17orf105B2RV13 164 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 HNRNPCL2B2RXH8 293 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 HNRNPCL3B7ZW38 293 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CLOCKO15516 846 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 NKX2-8O15522 239 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CSO75390 466 aaKnown RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SERPINB7O75635 380 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SOX30O94993 753 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 MFN2O95140 757 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 H6PDO95479 791 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CST1P01037 141 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 LDLRP01130 860 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SEMG1P04279 462 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 KLK3P07288 261 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 HEXBP07686 556 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CHRM4P08173 479 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 HNRNPCL4P0DMR1 293 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CDK4P11802 303 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ITIH1P19827 911 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 GABRA3P34903 492 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 IDUAP35475 653 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ETV5P41161 510 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 MAP3K8P41279 467 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 EMDP50402 254 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 EFNA3P52797 238 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CLDN6P56747 220 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 RPL15P61313 204 aaKnown RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 KCNJ10P78508 379 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 FUT5Q11128 374 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 FUT7Q11130 342 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 FOXO1Q12778 655 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF155Q12901 538 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 FOXF2Q12947 444 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ZNHIT3Q15649 155 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ATP6AP1Q15904 470 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 DUSP5Q16690 384 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ARHGAP11BQ3KRB8 267 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 DCAF12Q5T6F0 453 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 OGFRL1Q5TC84 451 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 PRAMEF8Q5VWM4 474 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 MLIPQ5VWP3 458 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 PRAMEF7Q5VXH5 474 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 LCN10Q6JVE6 187 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 HEPHL1Q6MZM0 1159 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 DHRS13Q6UX07 377 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SHISA6Q6ZSJ9 500 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 RAB11FIP2Q7L804 512 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 OLIG3Q7RTU3 272 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 C16orf62Q7Z3J2 963 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 VTCN1Q7Z7D3 282 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ARMC8Q8IUR7 673 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ZDHHC21Q8IVQ6 265 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SMYD1Q8NB12 490 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ICA1LQ8NDH6 482 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CATSPER1Q8NEC5 780 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 OR7G1Q8NGA0 311 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SPPL2AQ8TCT8 520 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 GPR151Q8TDV0 419 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CDS1Q92903 461 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CENPNQ96H22 339 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SENP5Q96HI0 755 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 COL21A1Q96P44 957 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 TRNT1Q96Q11 434 aaKnown RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 STACQ99469 402 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 TREX2Q9BQ50 279 aaPredicted RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ULBP3Q9BZM4 244 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 FOLH1BQ9HBA9 442 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 BCL2L10Q9HD36 194 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 SEPSECSQ9HD40 501 aaKnown RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 IL1RAPQ9NPH3 570 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 AGPAT4Q9NRZ5 378 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CALML5Q9NZT1 146 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 BAG5Q9UL15 447 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 ERVK-19Q9WJR5 959 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 B3GNT3Q9Y2A9 372 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 PCDHGB3Q9Y5G1 929 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CLCA3PQ9Y6N3 262 aa6.71□□□□□ -1.34
UBE4B-204ENST00000462658 MAP1BP46821 2468 aaKnown RBP6.71□□□□□ -1.34
UBE4B-204ENST00000462658 CEP295Q9C0D2 2601 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 SAC3D1A6NKF1 404 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 VSTM2BA6NLU5 285 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 IDSB3KWA1 339 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 OVOL3O00110 214 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 GNGT2O14610 69 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 SLC30A4O14863 429 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 NKX2-2O95096 273 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 AK1P00568 194 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 FABP3P05413 133 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 ETS2P15036 469 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 MAGEA2P43356 314 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 EMP2P54851 167 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 HPCAP84074 193 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 DUSP7Q16829 419 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 IFI44LQ53G44 452 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 DCST2Q5T1A1 773 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 FAAH2Q6GMR7 532 aa6.7□□□□□ -1.34
UBE4B-204ENST00000462658 FAM199XQ6PEV8 388 aaPredicted RBP6.7□□□□□ -1.34
UBE4B-204ENST00000462658 ZNF813Q6ZN06 617 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms