RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TMEM44Q2T9K0 475 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 BICRALQ6AI39 1079 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 OR5M10Q6IEU7 315 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 LRRC17Q8N6Y2 441 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 TMEM234Q8WY98 164 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 ST8SIA1Q92185 356 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 CDCA4Q9BXL8 241 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 P4HTMQ9NXG6 502 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 RSL24D1Q9UHA3 163 aaKnown RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 WIF1Q9Y5W5 379 aa12.97□□□□□ -0.33
USP39-207ENST00000450066 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
USP39-207ENST00000450066 ZNF701M0R085 212 aaPredicted RBP12.96□□□□□ -0.33
USP39-207ENST00000450066 INMTO95050 263 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 NDUFB2O95178 105 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.33
USP39-207ENST00000450066 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.33
USP39-207ENST00000450066 AADACL4Q5VUY2 407 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 TMEM81Q6P7N7 255 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 CLVS1Q8IUQ0 354 aaPredicted RBP12.96□□□□□ -0.33
USP39-207ENST00000450066 ASB15Q8WXK1 588 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 FCGR1BQ92637 280 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 RFKQ969G6 155 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 SECISBP2Q96T21 854 aaKnown RBP12.96□□□□□ -0.33
USP39-207ENST00000450066 FN3KQ9H479 309 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 CDCP1Q9H5V8 836 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 CPNE5Q9HCH3 593 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 CMC2Q9NRP2 79 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 PPP4R1LQ9P1A2 415 aa12.96□□□□□ -0.33
USP39-207ENST00000450066 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.96□□□□□ -0.33
USP39-207ENST00000450066 FREM2Q5SZK8 3169 aa12.96□□□□□ -0.34
USP39-207ENST00000450066 AHCTF1Q8WYP5 2266 aa12.96□□□□□ -0.34
USP39-207ENST00000450066 B4DXG7 233 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 LRRN3E7EW58 273 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 MAN1A2O60476 641 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 SERPINA7P05543 415 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 PEPDP12955 493 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 ACVR2AP27037 513 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 DCKP27707 260 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 GP2P55259 537 aaKnown RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 DLX5P56178 289 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 FOXK2Q01167 660 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 Q0VFX4 171 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 IL10RAQ13651 578 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 IRF3Q14653 427 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 UBE2UQ5VVX9 321 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 FCRLBQ6BAA4 426 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 IL20RBQ6UXL0 311 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 CCDC81Q6ZN84 652 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 ZNF420Q8TAQ5 688 aaPredicted RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 KTI12Q96EK9 354 aaPredicted RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 NANSQ9NR45 359 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 MRPS18AQ9NVS2 196 aaKnown RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 MED11Q9P086 117 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 TMED7-TICAM2A0A0A6YYA0 188 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 LOC101059948A0A1B0GTJ6 334 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 ETV2O00321 342 aaPredicted RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 SLC2A10O95528 541 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 PRKCAP17252 672 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 PRPS1P60891 318 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 ANKDD1AQ495B1 522 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 H3F3CQ6NXT2 135 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 ADGRG3Q86Y34 549 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 C9orf43Q8TAL5 461 aaPredicted RBP12.95□□□□□ -0.34
USP39-207ENST00000450066 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 MOGAT1Q96PD6 335 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 TMED7Q9Y3B3 224 aa12.95□□□□□ -0.34
USP39-207ENST00000450066 RIF1Q5UIP0 2472 aaKnown RBP12.94□□□□□ -0.34
USP39-207ENST00000450066 TRAV36DV7A0A075B6V5 113 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.94□□□□□ -0.34
USP39-207ENST00000450066 MASP2O00187 686 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 SLC25A12O75746 678 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 WISP1O95388 367 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 ASAH2BP0C7U1 165 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 CCNA2P20248 432 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 CD82P27701 267 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 GABREP78334 506 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 RAB40BQ12829 278 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 SLC35F1Q5T1Q4 408 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 GPR107Q5VW38 600 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 ARHGAP11AQ6P4F7 1023 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 POMZP3Q6PJE2 187 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 RAB43Q86YS6 212 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 CPOQ8IVL8 374 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 TMEM156Q8N614 296 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 TAAR8Q969N4 342 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 ISOC1Q96CN7 298 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 ZNF229Q9UJW7 825 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 HIF3AQ9Y2N7 669 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 COMMD3-BMI1R4GMX3 469 aa12.94□□□□□ -0.34
USP39-207ENST00000450066 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 IRGMA1A4Y4 181 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 RIIAD1A6NNX1 92 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 A8MVM7 634 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms