RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF550Q7Z398 422 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 STX19Q8N4C7 294 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 BCORP1Q8N888 145 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 LSM14AQ8ND56 463 aaKnown RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 TEX47Q8TBZ9 253 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 FAR1Q8WVX9 515 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 OSTF1Q92882 214 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 C12orf43Q96C57 262 aaKnown RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 MPP4Q96JB8 637 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SIGLEC11Q96RL6 698 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SLC25A19Q9HC21 320 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 FBXO34Q9NWN3 711 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 RPL36Q9Y3U8 105 aaKnown RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 TRIM64BA6NI03 449 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 TSPAN2O60636 221 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 IGKV1D-16P01601 117 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 CCL3P10147 92 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 OMPP47874 163 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF136P52737 540 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 ATP12AP54707 1039 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 GPR85P60893 370 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 PSPHP78330 225 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 CDK5Q00535 292 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 ROR2Q01974 943 aaKnown RBP14.23□□□□□ -0.13
SHOX2-202ENST00000425436 NTRK2Q16620 822 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 RTL4Q6ZR62 310 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 AHSA2Q719I0 299 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 GALNTL5Q7Z4T8 443 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 ANKRD13BQ86YJ7 626 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 CCDC103Q8IW40 242 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 GPALPP1Q8IXQ4 340 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF440Q8IYI8 595 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 CDK20Q8IZL9 346 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 FAM26EQ8N5C1 309 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 CLDN22Q8N7P3 220 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 Q8NA96 180 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 GGHQ92820 318 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 PNPLA2Q96AD5 504 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 C5orf34Q96MH7 638 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 POLDIP3Q9BY77 421 aaKnown RBP14.23□□□□□ -0.13
SHOX2-202ENST00000425436 TRIM2Q9C040 744 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 ACOT13Q9NPJ3 140 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 WARS2Q9UGM6 360 aaKnown RBP14.23□□□□□ -0.13
SHOX2-202ENST00000425436 TMEM5Q9Y2B1 443 aa14.23□□□□□ -0.13
SHOX2-202ENST00000425436 CDK2AP1O14519 115 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 FRS3O43559 492 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 MT-ND2P03891 347 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 NAGAP17050 411 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 CCNA2P20248 432 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 IL12BP29460 328 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 PEX19P40855 299 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 PIGFQ07326 219 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 OR1Q1Q15612 314 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 TBCEQ15813 527 aaPredicted RBP14.22□□□□□ -0.13
SHOX2-202ENST00000425436 TMEM44Q2T9K0 475 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 PRAMEF20Q5VT98 475 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 UBE2UQ5VVX9 321 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 TMEM236Q5W0B7 351 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 SLC22A10Q63ZE4 541 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 BICRALQ6AI39 1079 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 PRICKLE2Q7Z3G6 844 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 PSD4Q8NDX1 1056 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 SGCDQ92629 289 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 SCMH1Q96GD3 660 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 SGCZQ96LD1 299 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 SLC38A2Q96QD8 506 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 TIMMDC1Q9NPL8 285 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 CTPS2Q9NRF8 586 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 DEPPQ9NTK1 212 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 FLRT3Q9NZU0 649 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 SLC7A7Q9UM01 511 aa14.22□□□□□ -0.13
SHOX2-202ENST00000425436 CHCHD2Q9Y6H1 151 aaPredicted RBP14.22□□□□□ -0.13
SHOX2-202ENST00000425436 A0A0G2JMM0 328 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 A0A1W2PPB8 328 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 A0A1W2PRS3 328 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 IRGMA1A4Y4 181 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 KIR3DP1A8MWS1 328 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 H3BMQ9 156 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 NME2P1O60361 137 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 TP53P04637 393 aaPredicted RBP14.21□□□□□ -0.13
SHOX2-202ENST00000425436 NME2P22392 152 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 ACVR2AP27037 513 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 PCYT1AP49585 367 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 TMED10P49755 219 aaKnown RBP14.21□□□□□ -0.13
SHOX2-202ENST00000425436 GINS1Q14691 196 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 RPL13AP3Q6NVV1 102 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 SLC27A4Q6P1M0 643 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 NUP54Q7Z3B4 507 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.21□□□□□ -0.13
SHOX2-202ENST00000425436 ZAR1Q86SH2 424 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 SULF2Q8IWU5 870 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF527Q8NB42 609 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 HGDQ93099 445 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 COG8Q96MW5 612 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 CDCA4Q9BXL8 241 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 SH2D2AQ9NP31 389 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 AASSQ9UDR5 926 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 KCNE5Q9UJ90 142 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 SLC35A3Q9Y2D2 325 aa14.21□□□□□ -0.13
SHOX2-202ENST00000425436 HTR3EA5X5Y0 456 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms