RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 COQ2Q96H96 371 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 SELENOIQ9C0D9 397 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 VCPKMTQ9H867 229 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 POPDC2Q9HBU9 364 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 BTNL2Q9UIR0 455 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 DDX49Q9Y6V7 483 aaKnown RBP3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 KIF16BQ96L93 1317 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 CLSPNQ9HAW4 1339 aa3.18□□□□□ -1.9
RAB3GAP1-202ENST00000425393 PNPLA6Q8IY17 1366 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 IGHV3OR16-13A0A075B7E8 117 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 IGHV1OR21-1A0A087WYE8 117 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 USP27XA6NNY8 438 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 F5H6K3 240 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 DCTN6O00399 190 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ARPC3O15145 178 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 PRKAB2O43741 272 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 NPIPB7O75200 414 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 NR2C1P13056 603 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ZNF17P17021 662 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 MDKP21741 143 aaPredicted RBP3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 RBMXP38159 391 aaKnown RBP3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 CTRLP40313 264 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 CASP4P49662 377 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 KLRC3Q07444 240 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ZNF630Q2M218 657 aaPredicted RBP3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 C1orf146Q5VVC0 180 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 TMEM225Q6GV28 225 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 GALNT17Q6IS24 598 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 RFLNAQ6ZTI6 216 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 GDPD3Q7L5L3 318 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 NLRP9Q7RTR0 991 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 HTR3CQ8WXA8 447 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ST8SIA1Q92185 356 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ZSCAN5AQ9BUG6 496 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 C20orf85Q9H1P6 137 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 LRRN3Q9H3W5 708 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 MMP26Q9NRE1 261 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 SMPD3Q9NY59 655 aaPredicted RBP3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 SH3TC1Q8TE82 1336 aa3.17□□□□□ -1.9
RAB3GAP1-202ENST00000425393 A0A1B0GUS0 222 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 HELTA6NFD8 242 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 GFYI3L273 518 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 MAGEB3O15480 346 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 TRAF3IP2O43734 574 aaPredicted RBP3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 CAPN1P07384 714 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 HTR1EP28566 365 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 CD1BP29016 333 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 EFNB2P52799 333 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 CSNK1G2P78368 415 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 OR2G6Q5TZ20 316 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ATL3Q6DD88 541 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 KCNIP4Q6PIL6 250 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 RDH10Q8IZV5 341 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 TMEM123Q8N131 208 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 ATP6V0D2Q8N8Y2 350 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 SUMF2Q8NBJ7 301 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 IPMKQ8NFU5 416 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 OR51S1Q8NGJ8 323 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 OR52M1Q8NGK5 317 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 BRSK1Q8TDC3 778 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 DCUN1D4Q92564 292 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 MYDGFQ969H8 173 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 HIST1H4GQ99525 98 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 SUDS3Q9H7L9 328 aaPredicted RBP3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 AATFQ9NY61 560 aaKnown RBP eCLIP3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 MEMO1Q9Y316 297 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 TIMM10BQ9Y5J6 103 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 TTC21BQ7Z4L5 1316 aa3.16□□□□□ -1.9
RAB3GAP1-202ENST00000425393 METTL21EPA6NDL7 271 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 IDSB3KWA1 339 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 ABCD4O14678 606 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 KIR2DS4P43632 304 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 KLK7P49862 253 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 CRYBB1P53674 252 aaPredicted RBP3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 SPIBQ01892 262 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 TNFRSF17Q02223 184 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 KLRB1Q12918 225 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 VGLL4Q14135 290 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 SFT2D3Q587I9 215 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 C1orf100Q5SVJ3 147 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 IGFL2Q6UWQ7 119 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 RNF165Q6ZSG1 346 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 CCDC80Q76M96 950 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 OR10G3Q8NGC4 313 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 EFHD2Q96C19 240 aaPredicted RBP3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 TRIM44Q96DX7 344 aaPredicted RBP3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 ZNF799Q96GE5 643 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 NXF3Q9H4D5 531 aaKnown RBP3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 AIG1Q9NVV5 245 aa3.15□□□□□ -1.91
RAB3GAP1-202ENST00000425393 PTCH1Q13635 1447 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 A8MUA0 341 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 PFKFB2O60825 505 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 N4BP1O75113 896 aaKnown RBP3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 RHOBTB1O94844 696 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 STAMBPO95630 424 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 ALOX5P09917 674 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 RBMY1CP0DJD4 496 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 ZNF44P15621 663 aa3.14□□□□□ -1.91
RAB3GAP1-202ENST00000425393 HTR1FP30939 366 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms