RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CHRM4P08173 479 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 DANCRP0C864 163 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 KITP10721 976 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 IGHV1-2P23083 117 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 CDKN2CP42773 168 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 ATP5J2P56134 94 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 RPS4XP62701 263 aaKnown RBP8.34□□□□□ -1.07
NUP50-205ENST00000419387 PLAURQ03405 335 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 PPA1Q15181 289 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 STK11Q15831 433 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 SLC9B1Q4ZJI4 515 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 TIMM23BQ5SRD1 257 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 FBXW9Q5XUX1 488 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 ATG16L1Q676U5 607 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 ABLIM2Q6H8Q1 611 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 SSX8Q7RTT4 187 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
NUP50-205ENST00000419387 P2RY8Q86VZ1 359 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 ZNF433Q8N7K0 673 aaPredicted RBP8.34□□□□□ -1.07
NUP50-205ENST00000419387 NEUROG1Q92886 237 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 FBXW5Q969U6 566 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 MUCL1Q96DR8 90 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 OR11A1Q9GZK7 315 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 TRAPPC4Q9Y296 219 aa8.34□□□□□ -1.07
NUP50-205ENST00000419387 NOSIPQ9Y314 301 aaKnown RBP8.34□□□□□ -1.07
NUP50-205ENST00000419387 NIPBLQ6KC79 2804 aaeCLIP8.34□□□□□ -1.07
NUP50-205ENST00000419387 NAV3Q8IVL0 2385 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 TMED7-TICAM2A0A0A6YYA0 188 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 TMEM72A0PK05 275 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 ZNF716A6NP11 495 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 OVOL3O00110 214 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 FAAHO00519 579 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 RFXANKO14593 260 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 GPR171O14626 319 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 SLC22A3O75751 556 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 PGM3O95394 542 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 IL6P05231 212 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 SOD3P08294 240 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 NR2F1P10589 423 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 IDO1P14902 403 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 IL7RP16871 459 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 GGT1P19440 569 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 CCNA2P20248 432 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 COX5AP20674 150 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 SLC1A3P43003 542 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 MAGEA8P43361 318 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 POLR2HP52434 150 aaKnown RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 MAP2K6P52564 334 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 SLC16A1P53985 500 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 OR2B6P58173 313 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 BSPH1Q075Z2 132 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 GNA13Q14344 377 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 ZNF672Q499Z4 452 aaPredicted RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 PDCD4Q53EL6 469 aaKnown RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 COX20Q5RI15 118 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 NXNQ6DKJ4 435 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 CGB2Q6NT52 195 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 EPGNQ6UW88 154 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 SEZ6L2Q6UXD5 910 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 ATG4DQ86TL0 474 aaPredicted RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 CCDC103Q8IW40 242 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 UBE2J2Q8N2K1 259 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 GOLGA6L1Q8N7Z2 621 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 PIGXQ8TBF5 258 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 SMAP2Q8WU79 429 aaPredicted RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 WDR60Q8WVS4 1066 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 APH1AQ96BI3 265 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 DDIT4LQ96D03 193 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 DNAJA3Q96EY1 480 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 TRMT61AQ96FX7 289 aaKnown RBP8.33□□□□□ -1.08
NUP50-205ENST00000419387 OR52B2Q96RD2 323 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 TRIM2Q9C040 744 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 CCDC134Q9H6E4 229 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 TMEM181Q9P2C4 612 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 OSGIN1Q9UJX0 560 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 PRDM4Q9UKN5 801 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 TMED7Q9Y3B3 224 aa8.33□□□□□ -1.08
NUP50-205ENST00000419387 USF3Q68DE3 2245 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 A0A1W2PP18 115 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 CIB4A0PJX0 185 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 CFAP73A6NFT4 308 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 OR5H1A6NKK0 313 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 CCT8L1PA6NM43 557 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 AP3D1O14617 1153 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 ZNF208O43345 1280 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 EIF1BO60739 113 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 EDF1O60869 148 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 MRPL33O75394 65 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 IGHV3-9P01782 118 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 DBIP07108 87 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 IMPDH2P12268 514 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 RPS4Y1P22090 263 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 TACR3P29371 465 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 NTF4P34130 210 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 MDH1P40925 334 aaKnown RBP8.32□□□□□ -1.08
NUP50-205ENST00000419387 SLC35A1P78382 337 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 H3F3AP84243 136 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 GUCY1A3Q02108 690 aa8.32□□□□□ -1.08
NUP50-205ENST00000419387 EPS8Q12929 822 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms