RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ITGA10O75578 1167 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TNFSF15O95150 251 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 RCBTB2O95199 551 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TSPAN19P0C672 248 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ICAM2P13598 275 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 F8A1P23610 371 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MLF1P58340 268 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 RPS15P62841 145 aaKnown RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 EGR4Q05215 589 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 C17orf67Q0P5P2 114 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 Q0VFX4 171 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CEP78Q5JTW2 689 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MEDAGQ5VYS4 303 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 LNX2Q8N448 690 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TMCO5AQ8N6Q1 288 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 OR13C2Q8NGS9 318 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TMEM163Q8TC26 289 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 FANK1Q8TC84 345 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 GGHQ92820 318 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 Q96MT0 163 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TSSK6Q9BXA6 273 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 PRRG3Q9BZD7 231 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MCCC2Q9HCC0 563 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF160Q9HCG1 818 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 HHATLQ9HCP6 504 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 FAIMQ9NVQ4 179 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CLN6Q9NWW5 311 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ERVK-18Q9QC07 812 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 YARS2Q9Y2Z4 477 aaKnown RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CHCHD2Q9Y6H1 151 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 NCKAP5O14513 1909 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 LOC101059948A0A1B0GTJ6 334 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ELOA3DA6NLF2 546 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 KDM4EB2RXH2 506 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 STMND1H3BQB6 276 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 RGS10O43665 173 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 HCN1O60741 890 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 OR7A10O76100 309 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CDK1P06493 297 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 FUT1P19526 365 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 PTNP21246 168 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 EEF1B2P24534 225 aaKnown RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ACVR2AP27037 513 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 DLSTP36957 453 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SOX3P41225 446 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CRYZQ08257 329 aaKnown RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SNTA1Q13424 505 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 IL10RAQ13651 578 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TOMM34Q15785 309 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 COL28A1Q2UY09 1125 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ELOA3BQ3SY89 546 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ZBED5Q49AG3 693 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SYT14P1Q58G82 188 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SMARCD3Q6STE5 483 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SLC51BQ86UW2 128 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 LSRQ86X29 649 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TCEANCQ8N8B7 351 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF540Q8NDQ6 660 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ELOA3Q8NG57 546 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 OR2T33Q8NG76 320 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 OR10G3Q8NGC4 313 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ST8SIA1Q92185 356 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MUL1Q969V5 352 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SGTBQ96EQ0 304 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SH3YL1Q96HL8 342 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SAMD8Q96LT4 415 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 GPX7Q96SL4 187 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 PHOX2BQ99453 314 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 UBQLN3Q9H347 655 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 FBXL4Q9UKA2 621 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 BAIAP2Q9UQB8 552 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 WIF1Q9Y5W5 379 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CACNA1HO95180 2353 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 FZD7O75084 574 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 NPIPB7O75200 414 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ENTPD6O75354 484 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SEC14L2O76054 403 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MT-ND2P03891 347 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CEACAM1P13688 526 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CTRB1P17538 263 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MSX1P28360 303 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TACR3P29371 465 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 OTX2P32243 289 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 TTKP33981 857 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MASP1P48740 699 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CCR4P51679 360 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 MVKQ03426 396 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 EMX1Q04741 257 aaPredicted RBP5.02□□□□□ -1.61
EPHA4-202ENST00000409854 PIGFQ07326 219 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 PMS2P3Q13401 168 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 IRF3Q14653 427 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 QPRTQ15274 297 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 ZNF74Q16587 644 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SLC25A53Q5H9E4 307 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 CTRB2Q6GPI1 263 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 SLC30A6Q6NXT4 461 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 OPN5Q6U736 354 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 THSD4Q6ZMP0 1018 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 GRINAQ7Z429 371 aa5.02□□□□□ -1.61
EPHA4-202ENST00000409854 DTX1Q86Y01 620 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms