RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 HTR3EA5X5Y0 456 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 ALG1L2C9J202 215 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 AKAP8O43823 692 aaKnown RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 ZNF12P17014 697 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 RPS19P39019 145 aaKnown RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 ZNF322Q6U7Q0 402 aaPredicted RBP18.91■□□□□ 0.62
USP39-203ENST00000409470 DPY19L2P2Q6ZN68 376 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 TMEM99Q8N816 258 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 SDR9C7Q8NEX9 313 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 OR10H4Q8NGA5 316 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 OR4K13Q8NH42 304 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 DEPDC7Q96QD5 511 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 KLHL21Q9UJP4 597 aa18.91■□□□□ 0.62
USP39-203ENST00000409470 DAPL1A0PJW8 107 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 KHNYNO15037 678 aaKnown RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 NUDT14O95848 222 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 LALBAP00709 142 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 GYPBP06028 91 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 MRPL3P09001 348 aaKnown RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 HIST1H1CP16403 213 aaKnown RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 MST1P26927 711 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 TACR3P29371 465 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 DUSP3P51452 185 aaPredicted RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 EMP2P54851 167 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 NRG3P56975 720 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 CTRCQ99895 268 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 KLHDC3Q9BQ90 382 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 MESP1Q9BRJ9 268 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 ALG8Q9BVK2 526 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 FBXL4Q9UKA2 621 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 CAB39Q9Y376 341 aaPredicted RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 ADAM18Q9Y3Q7 739 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 TECTAO75443 2155 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 SAGE2PA6NJ88 616 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 SLC2A5P22732 501 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 GABRA5P31644 462 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 PRPS1P60891 318 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 CRTC2Q53ET0 693 aaPredicted RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 C22orf42Q6IC83 251 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 ZNF524Q96C55 264 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 TM9SF2Q99805 663 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 KCNS3Q9BQ31 491 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 SNTG1Q9NSN8 517 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 SF3B6Q9Y3B4 125 aaKnown RBP18.9■□□□□ 0.62
USP39-203ENST00000409470 PEX16Q9Y5Y5 336 aa18.9■□□□□ 0.62
USP39-203ENST00000409470 LRRTM2O43300 516 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 SCO2O43819 266 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 EIF4E2O60573 245 aaKnown RBP18.89■□□□□ 0.61
USP39-203ENST00000409470 SYPP08247 313 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 ZNF74Q16587 644 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 LPAL2Q16609 132 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 RGS21Q2M5E4 152 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 KLBQ86Z14 1044 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 LRFN5Q96NI6 719 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 NANSQ9NR45 359 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 ZDBF2Q9HCK1 2354 aa18.89■□□□□ 0.61
USP39-203ENST00000409470 C17orf51A8MQB3 221 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 BLOC1S5-TXNDC5H3BN57 136 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 IGF2P01344 180 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 CELP19835 753 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 EVI2BP34910 448 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 RORCP51449 518 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 RPS4XP62701 263 aaKnown RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 PSPHP78330 225 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ACSM1Q08AH1 577 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ATP1A4Q13733 1029 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ZNF385CQ66K41 422 aaPredicted RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 SLC23A3Q6PIS1 610 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 PAPD4Q6PIY7 484 aaKnown RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 TMEM105Q8N8V8 129 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 APCDD1LQ8NCL9 501 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 TP53INP1Q96A56 240 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 SEMA4CQ9C0C4 833 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ISG20L2Q9H9L3 353 aaKnown RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 KLHL1Q9NR64 748 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 INPP5EQ9NRR6 644 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 CDRT1O95170 752 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 SBK2P0C263 348 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 PGCP20142 388 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ERVK-25P63136 954 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 MXD1Q05195 221 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 CLPPQ16740 277 aaPredicted RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 POMZP3Q6PJE2 187 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 C16orf47Q6ZP98 133 aaPredicted RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 DTWD2Q8NBA8 298 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 NFAM1Q8NET5 270 aaPredicted RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 ATP6V1C2Q8NEY4 427 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 MOSPD2Q8NHP6 518 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 THAP3Q8WTV1 239 aaPredicted RBP18.88■□□□□ 0.61
USP39-203ENST00000409470 KCTD7Q96MP8 289 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ADAM19Q9H013 955 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 SIAEQ9HAT2 523 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 C12orf10Q9HB07 376 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 ADGRL4Q9HBW9 690 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 FBXO4Q9UKT5 387 aa18.88■□□□□ 0.61
USP39-203ENST00000409470 OR6C70A6NIJ9 312 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 VSTM2BA6NLU5 285 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 D6RAR5 112 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 CXCR1P25024 350 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 PPP5CP53041 499 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms