RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 GTPBP2Q9BX10 602 aaKnown RBP22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 NUAK2Q9H093 628 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 PEX16Q9Y5Y5 336 aa22.53■■□□□ 1.2
DNMT3A-206ENST00000406659 DAPL1A0PJW8 107 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 SAGE2PA6NJ88 616 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 GMFGO60234 142 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 SYPP08247 313 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 HIST1H1CP16403 213 aaKnown RBP22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 SLC2A5P22732 501 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 GABRA5P31644 462 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 RPS19P39019 145 aaKnown RBP22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 PRPS1P60891 318 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 ACSM1Q08AH1 577 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 CRTC2Q53ET0 693 aaPredicted RBP22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 ZFP41Q8N8Y5 198 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 OR4K13Q8NH42 304 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 TP53INP1Q96A56 240 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 TBX5Q99593 518 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 SEMA4CQ9C0C4 833 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 RERGLQ9H628 205 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 C12orf10Q9HB07 376 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 APMAPQ9HDC9 416 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 INPP5EQ9NRR6 644 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 OCIAD1Q9NX40 245 aa22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 SF3B6Q9Y3B4 125 aaKnown RBP22.52■■□□□ 1.2
DNMT3A-206ENST00000406659 ONECUT2O95948 504 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 CLUP10909 449 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 TACR3P29371 465 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 SLC23A3Q6PIS1 610 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 NFAM1Q8NET5 270 aaPredicted RBP22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 OR10H4Q8NGA5 316 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 DEPDC7Q96QD5 511 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 ADAM19Q9H013 955 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 FBXO4Q9UKT5 387 aa22.51■■□□□ 1.19
DNMT3A-206ENST00000406659 KHNYNO15037 678 aaKnown RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 NUDT14O95848 222 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 LALBAP00709 142 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 MST1P26927 711 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 ZNF74Q16587 644 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 ZNF385CQ66K41 422 aaPredicted RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 C22orf42Q6IC83 251 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 TUBA3EQ6PEY2 450 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 BPHLQ86WA6 291 aaPredicted RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 DTWD2Q8NBA8 298 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 SDR9C7Q8NEX9 313 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 NECAB3Q96P71 396 aaPredicted RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 KCNS3Q9BQ31 491 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 ALG8Q9BVK2 526 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 NANSQ9NR45 359 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 SNTG1Q9NSN8 517 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 CRNNQ9UBG3 495 aaPredicted RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 YARS2Q9Y2Z4 477 aaKnown RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 ASCC3Q8N3C0 2202 aaKnown RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 VSTM2BA6NLU5 285 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 TAF4O00268 1085 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 IDH3BO43837 385 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 PGCP20142 388 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 RORCP51449 518 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 RPS4XP62701 263 aaKnown RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 DBPQ10586 325 aaPredicted RBP22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 POU4F2Q12837 409 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 GALEQ14376 348 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 RGS21Q2M5E4 152 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 GXYLT1Q4G148 440 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 Q6ZNX1 250 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 KLBQ86Z14 1044 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 OR5W2Q8NH69 310 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 ZNF524Q96C55 264 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 CTRCQ99895 268 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 KLHDC3Q9BQ90 382 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 HAO2Q9NYQ3 351 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 FBXL4Q9UKA2 621 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 GSTK1Q9Y2Q3 226 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 ADAM18Q9Y3Q7 739 aa22.5■■□□□ 1.19
DNMT3A-206ENST00000406659 OR6C70A6NIJ9 312 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 BLOC1S5-TXNDC5H3BN57 136 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 SCO2O43819 266 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 FADS1O60427 444 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 GYPBP06028 91 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 MRPL3P09001 348 aaKnown RBP22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 SBK2P0C263 348 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 GP1BBP13224 206 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 CXCR1P25024 350 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 EVI2BP34910 448 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 PPP5CP53041 499 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 PAPD4Q6PIY7 484 aaKnown RBP22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 TMEM105Q8N8V8 129 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 APCDD1LQ8NCL9 501 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 ATP6V1C2Q8NEY4 427 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 LIPHQ8WWY8 451 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 KCTD7Q96MP8 289 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 TM9SF2Q99805 663 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 NPFFR2Q9Y5X5 522 aa22.49■■□□□ 1.19
DNMT3A-206ENST00000406659 A0A075B6Q4 140 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 D6RAR5 112 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 ARPC3O15145 178 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 CDRT1O95170 752 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 FGF5P12034 268 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 CELP19835 753 aa22.48■■□□□ 1.19
DNMT3A-206ENST00000406659 RAB15P59190 212 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms