RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ULK3Q6PHR2 472 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 POMZP3Q6PJE2 187 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 UBQLNLQ8IYU4 475 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 LILRA2Q8N149 483 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 ATP6V1C2Q8NEY4 427 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 OR6T1Q8NGN1 323 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 DDIT4LQ96D03 193 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 SLC47A1Q96FL8 570 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 PYURFQ96I23 114 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 HSH2DQ96JZ2 352 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CLPTM1LQ96KA5 538 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CADM1Q9BY67 442 aaKnown RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CXXC4Q9H2H0 198 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 TP63Q9H3D4 680 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-204ENST00000405578 C12orf10Q9HB07 376 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 SPRR3Q9UBC9 169 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 TNFRSF10DQ9UBN6 386 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 CHRNA9Q9UGM1 479 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 MEMO1Q9Y316 297 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF337Q9Y3M9 751 aa9.5□□□□□ -0.89
RPAIN-204ENST00000405578 TMED7-TICAM2A0A0A6YYA0 188 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 TRAPPC13A5PLN9 417 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ELOA3DA6NLF2 546 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-204ENST00000405578 AHRRA9YTQ3 701 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 SHISA8B8ZZ34 492 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 EIF1AYO14602 144 aaKnown RBP9.49□□□□□ -0.89
RPAIN-204ENST00000405578 SEC14L5O43304 696 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 PRKD3O94806 890 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 NTN1O95631 604 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 EPPINO95925 133 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 TFPIP10646 304 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 PSMA4P25789 261 aaKnown RBP9.49□□□□□ -0.89
RPAIN-204ENST00000405578 OR1E2P47887 323 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 LHX2P50458 406 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF136P52737 540 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 CRYBA2P53672 197 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 HOXC5Q00444 222 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 SRYQ05066 204 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 LTBQ06643 244 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 OR1Q1Q15612 314 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 SGCBQ16585 318 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ELOA3BQ3SY89 546 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ALG10BQ5I7T1 473 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 PGM2L1Q6PCE3 622 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 CYP2R1Q6VVX0 501 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 DEF8Q6ZN54 512 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ESPNLQ6ZVH7 1005 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 VTCN1Q7Z7D3 282 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 CD163Q86VB7 1156 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ELOA3Q8NG57 546 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 OR5M9Q8NGP3 310 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 POC1BQ8TC44 478 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 KLHL15Q96M94 604 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 MDFIQ99750 246 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 FOXC2Q99958 501 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 PRDM14Q9GZV8 571 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ADAM19Q9H013 955 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 TMEM185BQ9H7F4 350 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 DLL4Q9NR61 685 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 CTPS2Q9NRF8 586 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF835Q9Y2P0 537 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 TMED7Q9Y3B3 224 aa9.49□□□□□ -0.89
RPAIN-204ENST00000405578 FN1P02751 2386 aaKnown RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 A0A1B0GWA3 101 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 AQP12BA6NM10 295 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 CPSF4LA6NMK7 179 aaKnown RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 A8MVM7 634 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF208O43345 1280 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ADAM11O75078 769 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 OR5F1O95221 314 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 SYNGR4O95473 234 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 THRBP10828 461 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ZNF708P17019 499 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ACVR2AP27037 513 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 SFTPDP35247 375 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 STARP49675 285 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 CSNK2A1P68400 391 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ZSCAN26Q16670 478 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 TMEM176BQ3YBM2 270 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 FAM98BQ52LJ0 330 aaKnown RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 SYT14P1Q58G82 188 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ENTPD8Q5MY95 495 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 TMEM211Q6ICI0 200 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 C5orf46Q6UWT4 87 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 Q6ZPB1 254 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
RPAIN-204ENST00000405578 COMTD1Q86VU5 262 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 SPATA24Q86W54 205 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 AQP12AQ8IXF9 295 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 OR10Q1Q8NGQ4 319 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 OR2V1Q8NHB1 315 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ZPLD1Q8TCW7 415 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ADAMTS16Q8TE57 1224 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 CA5BP1Q8WTZ4 195 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 C3orf49Q96BT1 292 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 SDCCAG3Q96C92 435 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 ZHX1-C8orf76Q96EF9 292 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 WDYHV1Q96HA8 205 aa9.48□□□□□ -0.89
RPAIN-204ENST00000405578 MPP4Q96JB8 637 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms