RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 M1APQ8TC57 530 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 ZNF775Q96BV0 537 aaPredicted RBP10.62□□□□□ -0.71
SKA3-203ENST00000400018 GPR87Q9BY21 358 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 POLR2J3Q9H1A7 115 aaKnown RBP10.62□□□□□ -0.71
SKA3-203ENST00000400018 MED20Q9H944 212 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 PPP4R1LQ9P1A2 415 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 LRFN1Q9P244 771 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 OSGIN1Q9UJX0 560 aa10.62□□□□□ -0.71
SKA3-203ENST00000400018 A0A1W2PRQ8 180 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 FAM166BA8MTA8 275 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 NOTOA8MTQ0 251 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 HPP00738 406 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 FBXO45P0C2W1 286 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 STARP49675 285 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 COPZ1P61923 177 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 DCAF7P61962 342 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 ADARB1P78563 741 aaKnown RBP10.61□□□□□ -0.71
SKA3-203ENST00000400018 DGCR6Q14129 220 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 TRAM2Q15035 370 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 ZBTB46Q86UZ6 589 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 CLEC1AQ8NC01 280 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 SLC38A4Q969I6 547 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 PLEKHA8Q96JA3 519 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 SAMD8Q96LT4 415 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 FOXN4Q96NZ1 517 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 TNFRSF13CQ96RJ3 184 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 ADNPQ9H2P0 1102 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 ADAM18Q9Y3Q7 739 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 PTGES3LE9PB15 166 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 BLOC1S5-TXNDC5H3BN57 136 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 BCKDKO14874 412 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 ITGB2P05107 769 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 F13BP05160 661 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 HMGA2P52926 109 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 PSMD4P55036 377 aaKnown RBP10.61□□□□□ -0.71
SKA3-203ENST00000400018 CD47Q08722 323 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 APOFQ13790 326 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 NTRK2Q16620 822 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 GLYR1Q49A26 553 aaPredicted RBP10.61□□□□□ -0.71
SKA3-203ENST00000400018 CCDC103Q8IW40 242 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 UBQLNLQ8IYU4 475 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 SVOPLQ8N434 492 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 SLC22A8Q8TCC7 542 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 TP53INP1Q96A56 240 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 WASF3Q9UPY6 502 aa10.61□□□□□ -0.71
SKA3-203ENST00000400018 YARS2Q9Y2Z4 477 aaKnown RBP10.61□□□□□ -0.71
SKA3-203ENST00000400018 IGHV3-15A0A0B4J1V0 119 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 C11orf98E9PRG8 122 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 SERPINA7P05543 415 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 CAPGP40121 348 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 KRT80Q6KB66 452 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 SHFQ7M4L6 423 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 WDFY1Q8IWB7 410 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 CYB561A3Q8NBI2 242 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 BPIFB6Q8NFQ5 453 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 OR51L1Q8NGJ5 315 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 TVP23BQ9NYZ1 205 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 WIF1Q9Y5W5 379 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 DENRO43583 198 aaKnown RBP10.6□□□□□ -0.71
SKA3-203ENST00000400018 NEURL1O76050 574 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 PDGFAP04085 211 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 GYPBP06028 91 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 ADRA2AP08913 450 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 CLUP10909 449 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 ZNF12P17014 697 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 ELOAQ14241 798 aaKnown RBP10.6□□□□□ -0.71
SKA3-203ENST00000400018 C3AR1Q16581 482 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 GALNTL5Q7Z4T8 443 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 PSD4Q8NDX1 1056 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 MOSPD2Q8NHP6 518 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 ACOT11Q8WXI4 607 aaPredicted RBP10.6□□□□□ -0.71
SKA3-203ENST00000400018 HTRA1Q92743 480 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 TAAR8Q969N4 342 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 TMCO6Q96DC7 493 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 BPIFA2Q96DR5 249 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 OSBPL11Q9BXB4 747 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 FN3KQ9H479 309 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 ZNF696Q9H7X3 374 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 TRIM45Q9H8W5 580 aaPredicted RBP10.6□□□□□ -0.71
SKA3-203ENST00000400018 TAS2R16Q9NYV7 291 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 MRTO4Q9UKD2 239 aaKnown RBP10.6□□□□□ -0.71
SKA3-203ENST00000400018 POU2F3Q9UKI9 436 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 RAXQ9Y2V3 346 aa10.6□□□□□ -0.71
SKA3-203ENST00000400018 TMEM72A0PK05 275 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ELOA3DA6NLF2 546 aaPredicted RBP10.59□□□□□ -0.71
SKA3-203ENST00000400018 FAM171A2A8MVW0 826 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 C1QTNF9BB2RNN3 333 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 H7C1C5 153 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 TRAPPC6AO75865 159 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 C1QTNF9P0C862 333 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 LCN6P62502 163 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ELOA3BQ3SY89 546 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ADGRG3Q86Y34 549 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 FAM71CQ8NEG0 241 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ELOA3Q8NG57 546 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 OR4Q3Q8NH05 313 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 UCK2Q9BZX2 261 aa10.59□□□□□ -0.71
SKA3-203ENST00000400018 ZNF556Q9HAH1 456 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms