RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SGCAQ16586 387 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 PRSS53Q2L4Q9 553 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 PAQR6Q6TCH4 344 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 LRRC17Q8N6Y2 441 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF566Q969W8 418 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF222Q9UK12 451 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 FOLR1P15328 257 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 MVDP53602 400 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 GUSBP11Q6P575 273 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 OR4C3Q8NH37 302 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 C8orf44Q96CB5 159 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 LRRN3Q9H3W5 708 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 NPIPA2E9PIF3 369 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 NPIPA3F8WFD2 350 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 DSCR3O14972 297 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 SLC16A7O60669 478 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 DNAJB6O75190 326 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 CSO75390 466 aaKnown RBP12.93□□□□□ -0.34
SCAF4-202ENST00000399804 H2BFMP0C1H6 154 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 ITGA3P26006 1051 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 MAPK14Q16539 360 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 PRICKLE4Q2TBC4 344 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 ALDH16A1Q8IZ83 802 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 OR6Q1Q8NGQ2 317 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 OR2I1PQ8NGU4 316 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF717Q9BY31 904 aaPredicted RBP12.93□□□□□ -0.34
SCAF4-202ENST00000399804 ASXL3Q9C0F0 2248 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 SPATA2Q9UM82 520 aa12.93□□□□□ -0.34
SCAF4-202ENST00000399804 CEP350Q5VT06 3117 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ARHGEF17Q96PE2 2063 aaPredicted RBP12.92□□□□□ -0.34
SCAF4-202ENST00000399804 IQCMA0A1B0GVH7 501 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 LRRN3E7EW58 273 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 SCG5P05408 212 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 HTR1FP30939 366 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 PITPNAQ00169 270 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 DIABLOQ9NR28 239 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 SACM1LQ9NTJ5 587 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ASB6Q9NWX5 421 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 CORINQ9Y5Q5 1042 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 PLXNA3P51805 1871 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 FCER2P06734 321 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF20P17024 532 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF43P17038 809 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 GRK5P34947 590 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 EMDP50402 254 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ADAM8P78325 824 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 CD300CQ08708 224 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 Q96M85 177 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF681Q96N22 645 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 B3GNT4Q9C0J1 378 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 TTYH1Q9H313 450 aaPredicted RBP12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ZC4H2Q9NQZ6 224 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 ENAMQ9NRM1 1142 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 SUSD5O60279 629 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 NKX2-2O95096 273 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 FAUP35544 74 aaKnown RBP12.92□□□□□ -0.34
SCAF4-202ENST00000399804 CCL7P80098 99 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 OR1L3Q8NH93 324 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 PLA2G12AQ9BZM1 189 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 TBCCD1Q9NVR7 557 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 CTSFQ9UBX1 484 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 PCDHGB6Q9Y5F9 930 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 NPFFR2Q9Y5X5 522 aa12.92□□□□□ -0.34
SCAF4-202ENST00000399804 TAF4O00268 1085 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 ORC5O43913 435 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 CD97P48960 835 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 CAV3P56539 151 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 ACSM3Q53FZ2 586 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 UBE2UQ5VVX9 321 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 SLC6A19Q695T7 634 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 Q8N402 240 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 SIMC1Q8NDZ2 872 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 FN3KQ9H479 309 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 FFAR1O14842 300 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 RAD1O60671 282 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 RAB3BP20337 219 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 RIDAP52758 137 aaKnown RBP12.91□□□□□ -0.34
SCAF4-202ENST00000399804 C17orf67Q0P5P2 114 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 YOD1Q5VVQ6 348 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-202ENST00000399804 SLC18B1Q6NT16 456 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF322Q6U7Q0 402 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-202ENST00000399804 KMT5CQ86Y97 462 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 TOMM5Q8N4H5 51 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 OR4D11Q8NGI4 311 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 OR4C15Q8NGM1 316 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 TMED7-TICAM2A0A0A6YYA0 188 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
SCAF4-202ENST00000399804 CD14P08571 375 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 GDI2P50395 445 aaKnown RBP12.91□□□□□ -0.34
SCAF4-202ENST00000399804 AP3S2P59780 193 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 GPR139Q6DWJ6 353 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 OPN5Q6U736 354 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 TMPRSS12Q86WS5 348 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF511Q8NB15 262 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms