RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TPRA1Q86W33 373 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 TMEM151BQ8IW70 566 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 UBQLNLQ8IYU4 475 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 SYS1Q8N2H4 156 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 LRRC17Q8N6Y2 441 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 TEX19Q8NA77 164 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 OR4K13Q8NH42 304 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 EFHD2Q96C19 240 aaPredicted RBP15.37■□□□□ 0.05
NUP50-202ENST00000396096 LMF1Q96S06 567 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 NMNAT2Q9BZQ4 307 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 SLC22A4Q9H015 551 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 ADAM30Q9UKF2 790 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 MAU2Q9Y6X3 613 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 IGHV1OR21-1A0A087WYE8 117 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 DVL2O14641 736 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 SDC3O75056 442 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 GYPBP06028 91 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 OR2T7P0C7T2 308 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 UBL4AP11441 157 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 OR2B6P58173 313 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 OR12D2P58182 307 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 PRPS1P60891 318 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 E2F1Q01094 437 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 LGALS3BPQ08380 585 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 DBPQ10586 325 aaPredicted RBP15.37■□□□□ 0.05
NUP50-202ENST00000396096 CD226Q15762 336 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 SLC35D3Q5M8T2 416 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 HBMQ6B0K9 141 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 ARL9Q6T311 187 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 TTLL10Q6ZVT0 673 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 SDR9C7Q8NEX9 313 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 OR2T27Q8NH04 317 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 KCTD12Q96CX2 325 aaKnown RBP15.37■□□□□ 0.05
NUP50-202ENST00000396096 PGLYRP3Q96LB9 341 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 NEDD4LQ96PU5 975 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 CNN2Q99439 309 aaKnown RBP15.37■□□□□ 0.05
NUP50-202ENST00000396096 FOXQ1Q9C009 403 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 PNO1Q9NRX1 252 aaKnown RBP15.37■□□□□ 0.05
NUP50-202ENST00000396096 INIPQ9NRY2 104 aa15.37■□□□□ 0.05
NUP50-202ENST00000396096 J3QLW9 94 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 NUDT21O43809 227 aaKnown RBP15.36■□□□□ 0.05
NUP50-202ENST00000396096 DDAH2O95865 285 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 TFP02787 698 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ZNF19P17023 458 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 DIO1P49895 249 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 NRG3P56975 720 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ACTA2P62736 377 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ACTG2P63267 376 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 IL10RAQ13651 578 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 NR2C2APQ86WQ0 139 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 RAB43Q86YS6 212 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 MS4A15Q8N5U1 240 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ZNF321PQ8N8H1 164 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 NPEPL1Q8NDH3 523 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ABHD4Q8TB40 342 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ZNF721Q8TF20 911 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ADIPOR1Q96A54 375 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 LCORQ96JN0 433 aaPredicted RBP15.36■□□□□ 0.05
NUP50-202ENST00000396096 UBL7Q96S82 380 aaPredicted RBP15.36■□□□□ 0.05
NUP50-202ENST00000396096 NXF5Q9H1B4 397 aaKnown RBP15.36■□□□□ 0.05
NUP50-202ENST00000396096 ST6GALNAC2Q9UJ37 374 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 MRTO4Q9UKD2 239 aaKnown RBP15.36■□□□□ 0.05
NUP50-202ENST00000396096 PAIP2BQ9ULR5 123 aaKnown RBP15.36■□□□□ 0.05
NUP50-202ENST00000396096 PCDHGB7Q9Y5F8 929 aa15.36■□□□□ 0.05
NUP50-202ENST00000396096 ELOA3DA6NLF2 546 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 LRRN3E7EW58 273 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 SCDO00767 359 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 OGG1O15527 345 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 OIP5O43482 229 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 UTS2O95399 124 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 CD1AP06126 327 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 RPS5P46782 204 aaKnown RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 OR1D4P47884 311 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 OR1D5P58170 312 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 DCAF7P61962 342 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ELAVL1Q15717 326 aaKnown RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 ELOA3BQ3SY89 546 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 CDONQ4KMG0 1287 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ZNF544Q6NX49 715 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ZNF517Q6ZMY9 492 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 SSX6Q7RTT6 188 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 NUP54Q7Z3B4 507 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 PLXDC1Q8IUK5 500 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 D2HGDHQ8N465 521 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 SPEM1Q8N4L4 309 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ELOA3Q8NG57 546 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 OR5J2Q8NH18 312 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 OR14A16Q8NHC5 309 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 DNASE2BQ8WZ79 361 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 TSLPQ969D9 159 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 SHDQ96IW2 340 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 DEPDC7Q96QD5 511 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 LRRN3Q9H3W5 708 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 C12orf10Q9HB07 376 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 HIF3AQ9Y2N7 669 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 TCRBV16S1A1N1A0A5B0 115 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 ZNF264O43296 627 aa15.35■□□□□ 0.05
NUP50-202ENST00000396096 APEHP13798 732 aaKnown RBP15.35■□□□□ 0.05
NUP50-202ENST00000396096 APEX1P27695 318 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms