RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 H3F3AP84243 136 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 TGFBR3Q03167 851 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 MSMPQ1L6U9 139 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 KLHL26Q53HC5 615 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 LEG1Q6P5S2 330 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 IKBIPQ70UQ0 350 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 CDRT4Q8N9R6 151 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 FBXO30Q8TB52 745 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 APIPQ96GX9 242 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF48Q96MX3 618 aaPredicted RBP11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 CARD8Q9Y2G2 431 aa11.75□□□□□ -0.53
VCPKMT-201ENST00000395859 STX16-NPEPL1H3BU86 382 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 STX16O14662 325 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 IGKV3-15P01624 115 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 PRPS2P11908 318 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 PAX7P23759 505 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 GSTM5P46439 218 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 CSNK2A1P68400 391 aaPredicted RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 MRPS11P82912 194 aaKnown RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 DUSP5Q16690 384 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 TECRLQ5HYJ1 363 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 FAM71E1Q6IPT2 247 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 ACSM5Q6NUN0 579 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 RPS27LQ71UM5 84 aaKnown RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 SPATA21Q7Z572 469 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 MYPOPQ86VE0 399 aaPredicted RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 FAM169BQ8N8A8 192 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 CEP70Q8NHQ1 597 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 PHOSPHO1Q8TCT1 267 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 CKAP2Q8WWK9 683 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 ACPTQ9BZG2 426 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 TPK1Q9H3S4 243 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 EQTNQ9NQ60 294 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF275Q9NSD4 429 aaPredicted RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 CPSF2Q9P2I0 782 aaKnown RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 PSMC3IPQ9P2W1 217 aaPredicted RBP11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 SNX6Q9UNH7 406 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 FLVCR1Q9Y5Y0 555 aa11.74□□□□□ -0.53
VCPKMT-201ENST00000395859 ARPC4-TTLL3A0A0A6YYG9 625 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 GNG14A0A1W2PPG7 69 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 SH3PXD2BA1X283 911 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 HMX2A2RU54 273 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 SULT2B1O00204 365 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 KLHL2O95198 593 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 MPZL1O95297 269 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 NUDT14O95848 222 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 C2P06681 752 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 RPS17P08708 135 aaKnown RBP11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 ANPEPP15144 967 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 HPGDP15428 266 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 SERPINB9P50453 376 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 QPRTQ15274 297 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 FAM83EQ2M2I3 478 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 NDUFAF6Q330K2 333 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 VPS26BQ4G0F5 336 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 TIGD2Q4W5G0 525 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 CCNJQ5T5M9 372 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 ASPHD2Q6ICH7 369 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 CCDC103Q8IW40 242 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 RDH5Q92781 318 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 QRSL1Q9H0R6 528 aaKnown RBP11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF665Q9H7R5 613 aa11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.73□□□□□ -0.53
VCPKMT-201ENST00000395859 M0QZ24 198 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 MANBAO00462 879 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 DNPH1O43598 174 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 PMS2P2O95744 297 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 HSPA4LO95757 839 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 GATA3P23771 443 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 EVX1P49640 407 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 KRTAP10-3P60369 221 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 SLC9A3R2Q15599 337 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 BEAN1Q3B7T3 259 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 SPIN4Q56A73 249 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 TTMPQ5BVD1 217 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 KPRPQ5T749 579 aaPredicted RBP11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 SAXO2Q658L1 398 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 KLHL24Q6TFL4 600 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF551Q7Z340 670 aaPredicted RBP11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 OR5W2Q8NH69 310 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF483Q8TF39 744 aaPredicted RBP11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 TMIGD2Q96BF3 282 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 PHF21BQ96EK2 531 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 RBM4BQ9BQ04 359 aaKnown RBP11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 KCNS3Q9BQ31 491 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 NELFAQ9H3P2 528 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 DYNLRB1Q9NP97 96 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 UPB1Q9UBR1 384 aa11.72□□□□□ -0.53
VCPKMT-201ENST00000395859 SYNGR3O43761 229 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 SHOX2O60902 331 aaPredicted RBP11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 NCR1O76036 304 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 OTCP00480 354 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms